RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SDCBP2Q9H190 292 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 CDC23Q9UJX2 597 aa28.05■■■□□ 2.08
ATPAF1-202ENST00000371937 PTGESO14684 152 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 MGEA5O60502 916 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 CILPO75339 1184 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 ATP1A1P05023 1023 aaKnown RBP28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 PGBD4Q96DM1 585 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 PPP1R10Q96QC0 940 aaKnown RBP28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 RNF19AQ9NV58 838 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 SLU7O95391 586 aaKnown RBP28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 INCA1Q0VD86 236 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 TCEAL1Q15170 157 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 ZFP42Q96MM3 310 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 UBN1Q9NPG3 1134 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 BARX2Q9UMQ3 279 aaPredicted RBP28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 SAR1BQ9Y6B6 198 aa28.04■■■□□ 2.08
ATPAF1-202ENST00000371937 SELPP16109 830 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 NSFP46459 744 aaKnown RBP28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 AMPD2Q01433 879 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 CENPCQ03188 943 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 CTU1Q7Z7A3 348 aaKnown RBP28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 DNAJC5GQ8N7S2 189 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 TPCN2Q8NHX9 752 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 TRIM11Q96F44 468 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 SNX9Q9Y5X1 595 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 MYH10P35580 1976 aa28.03■■■□□ 2.08
ATPAF1-202ENST00000371937 GRID2IPA4D2P6 1211 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 PPEF2O14830 753 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 MED7O43513 233 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 THP07101 528 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 LRPAP1P30533 357 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 MLH1P40692 756 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 RAD23BP54727 409 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 AGMOQ6ZNB7 445 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 LRRC8DQ7L1W4 858 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 SYCE1Q8N0S2 351 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 ARHGEF26Q96DR7 871 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 CYFIP2Q96F07 1278 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 GAD1Q99259 594 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 GTF3C4Q9UKN8 822 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 BRCA2P51587 3418 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 MEIS3P2A8K0S8 358 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 LSM8O95777 96 aaKnown RBP28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 GTF2F1P35269 517 aaKnown RBP eCLIP28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 SOX4Q06945 474 aaPredicted RBP28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 MBTPS1Q14703 1052 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 LPPQ93052 612 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 TMEM176AQ96HP8 235 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 PCDHGC3Q9UN70 934 aa28.02■■■□□ 2.08
ATPAF1-202ENST00000371937 ARL5CA6NH57 179 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 MYBL1P10243 752 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 BRD2P25440 801 aaKnown RBP28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 TAF6P49848 677 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 HADHBP55084 474 aaKnown RBP28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 SV2CQ496J9 727 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 NAA35Q5VZE5 725 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 GSTCDQ8NEC7 633 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 WHAMMQ8TF30 809 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 CPA5Q8WXQ8 436 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 GDAP2Q9NXN4 497 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 CTTNBP2NLQ9P2B4 639 aa28.01■■■□□ 2.07
ATPAF1-202ENST00000371937 CYP1A2P05177 515 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 CD19P15391 556 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 PRLRP16471 622 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 NOMO3P69849 1222 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 FBXO46Q6PJ61 603 aaPredicted RBP28■■■□□ 2.07
ATPAF1-202ENST00000371937 FAM43BQ6ZT52 329 aaPredicted RBP28■■■□□ 2.07
ATPAF1-202ENST00000371937 LRRC57Q8N9N7 239 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 SLC4A11Q8NBS3 891 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 ZNF653Q96CK0 615 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 VCPIP1Q96JH7 1222 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 ZNF518BQ9C0D4 1074 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 CRISPLD2Q9H0B8 497 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 RSAD1Q9HA92 442 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 RGS18Q9NS28 235 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 KIAA1257Q9ULG3 409 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 CEP83Q9Y592 693 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 SCN1AP35498 2009 aa28■■■□□ 2.07
ATPAF1-202ENST00000371937 UQCRHLA0A096LP55 91 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 KPNA7A9QM74 516 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 PITPNM1O00562 1244 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 UQCRHP07919 91 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 MCOLN2Q8IZK6 566 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 FTHL17Q9BXU8 183 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 ELOVL4Q9GZR5 314 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 GOLGA2P5Q9HBQ8 144 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 OSGEPQ9NPF4 335 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 SNX12Q9UMY4 172 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 FAM170AA1A519 330 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 TFRCP02786 760 aaKnown RBP27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 CFHP08603 1231 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 NDST1P52848 882 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 WHAMMP3Q1A5X7 153 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 PASD1Q8IV76 773 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 RNF169Q8NCN4 708 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 TMEM35BQ8NCS4 154 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 TFAP2BQ92481 460 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 ZNF333Q96JL9 665 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 NT5C1AQ9BXI3 368 aa27.99■■■□□ 2.07
ATPAF1-202ENST00000371937 UVRAGQ9P2Y5 699 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms