RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TRPM8Q7Z2W7 1104 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 PPIL6Q8IXY8 311 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 LRRC71Q8N4P6 559 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 IDI2Q9BXS1 227 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 SMYD3Q9H7B4 428 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 GPRC5CQ9NQ84 441 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 SLC38A7Q9NVC3 462 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 RAB21Q9UL25 225 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 MYOM1P52179 1685 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 ATP9BO43861 1147 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 RECQLP46063 649 aaPredicted RBP12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 SULT1E1P49888 294 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 MAPRE2Q15555 327 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 EFHC1Q5JVL4 640 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 CENPKQ9BS16 269 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 FAM8A1Q9UBU6 413 aa12.44□□□□□ -0.42
DEPDC1-201ENST00000370966 A0A087X0B3 334 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 GOLGA8RI6L899 631 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 MTSS1O43312 755 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 MOCS2O96007 188 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 SEC24CP53992 1094 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 ACTN3Q08043 901 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 PDK1Q15118 436 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 C4orf33Q8N1A6 199 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 PACSIN1Q9BY11 444 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 PRDM4Q9UKN5 801 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 RIMS1Q86UR5 1692 aaKnown RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 CYTH3O43739 400 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 SGPL1O95470 568 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 SUPT20HL2P0C7V6 817 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 RARBP10826 455 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 HOXA10P31260 410 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 TCF7P36402 384 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 MEA1Q16626 185 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 NRBF2Q96F24 287 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 PPP1R2P1Q96PQ5 205 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 TNPO2O14787 897 aaKnown RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 DNAJC8O75937 253 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 PCSK1P29120 753 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 PNPLA4P41247 253 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 MCL1Q07820 350 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 STX3Q13277 289 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 FASTKD1Q53R41 847 aaKnown RBP12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 FRA10AC1Q70Z53 315 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 MRGBPQ9NV56 204 aa12.43□□□□□ -0.42
DEPDC1-201ENST00000370966 TTC36A6NLP5 189 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 SV2CQ496J9 727 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 NIPA1Q7RTP0 329 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 CD302Q8IX05 232 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 TRIML2Q8N7C3 387 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 CAVIN3Q969G5 261 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 PARK7Q99497 189 aaKnown RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 CHMP2BQ9UQN3 213 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 L3MBTL1Q9Y468 752 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 HOXD10P28358 340 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 IL1RL1Q01638 556 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 ANO5Q75V66 913 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 PIP4K2CQ8TBX8 421 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 ATP8B4Q8TF62 1192 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 WHRNQ9P202 907 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 CCT8L1PA6NM43 557 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 LRRIQ3A6PVS8 624 aaPredicted RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 PGM1P36871 562 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 SLC26A2P50443 739 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 PTK7Q13308 1070 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 EFTUD2Q15029 972 aaKnown RBP eCLIP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 ELMSAN1Q6PJG2 1045 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 GPRC5AQ8NFJ5 357 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 SPON2Q9BUD6 331 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 XAB2Q9HCS7 855 aaKnown RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 F5H423 210 aaPredicted RBP12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 CES2O00748 559 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 RAD23BP54727 409 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 ZNF235Q14590 738 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 TRADDQ15628 312 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 SV2AQ7L0J3 742 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 MTMR8Q96EF0 704 aa12.42□□□□□ -0.42
DEPDC1-201ENST00000370966 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 CYP2C9P11712 490 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 SPRP35270 261 aaPredicted RBP12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 RARRES1P49788 294 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 PSMC6P62333 389 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 ANO4Q32M45 955 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 DNAL1Q4LDG9 190 aa12.41□□□□□ -0.42
DEPDC1-201ENST00000370966 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms