RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 SLC10A6Q3KNW5 377 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 DGKKQ5KSL6 1271 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 STPG1Q5TH74 334 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 RALGPS2Q86X27 583 aaPredicted RBP16.81■□□□□ 0.28
SSR4-204ENST00000370087 APPL2Q8NEU8 664 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 ERMNQ8TAM6 284 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
SSR4-204ENST00000370087 E2F7Q96AV8 911 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 CHFRQ96EP1 664 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 MAFFQ9ULX9 164 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 SLC27A5Q9Y2P5 690 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 CACNA1GO43497 2377 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 BAHCC1Q9P281 2608 aa16.81■□□□□ 0.28
SSR4-204ENST00000370087 M0QZQ0 153 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 HIP1RO75146 1068 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 ZNF806P0C7X5 589 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
SSR4-204ENST00000370087 RAP1GAPP47736 663 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 CDR1P51861 262 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 TCEAL6Q6IPX3 200 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 C12orf50Q8NA57 414 aaPredicted RBP16.8■□□□□ 0.28
SSR4-204ENST00000370087 GAB3Q8WWW8 586 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 TCEAL3Q969E4 200 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 TMEM209Q96SK2 561 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 RUSC1Q9BVN2 902 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 GPR88Q9GZN0 384 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 SMG9Q9H0W8 520 aaKnown RBP16.8■□□□□ 0.28
SSR4-204ENST00000370087 TMEM134Q9H6X4 195 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 KIAA1024Q9UPX6 916 aa16.8■□□□□ 0.28
SSR4-204ENST00000370087 FOXD2O60548 495 aaPredicted RBP16.79■□□□□ 0.28
SSR4-204ENST00000370087 RPP40O75818 363 aaKnown RBP16.79■□□□□ 0.28
SSR4-204ENST00000370087 OAZ2O95190 189 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 HOXB3P14651 431 aaPredicted RBP16.79■□□□□ 0.28
SSR4-204ENST00000370087 GUCY2FP51841 1108 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 YWHAHQ04917 246 aaPredicted RBP16.79■□□□□ 0.28
SSR4-204ENST00000370087 NBR1Q14596 966 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 PLA2G2CQ5R387 149 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 GPR158Q5T848 1215 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 C1orf228Q6PIY5 440 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 ATAD1Q8NBU5 361 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 HAPLN2Q9GZV7 340 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 DDX19AQ9NUU7 478 aaKnown RBP16.79■□□□□ 0.28
SSR4-204ENST00000370087 ANKFY1Q9P2R3 1169 aa16.79■□□□□ 0.28
SSR4-204ENST00000370087 MTMR11A4FU01 709 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 E9PMD0 336 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 PPEF2O14830 753 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 SLC16A4O15374 487 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 KCNK5O95279 499 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 CXCL8P10145 99 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSR4-204ENST00000370087 EPHB3P54753 998 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 CYP4F8P98187 520 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 CENPPQ6IPU0 288 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 FSTL4Q6MZW2 842 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 DNAJB7Q7Z6W7 309 aaPredicted RBP16.78■□□□□ 0.28
SSR4-204ENST00000370087 C4orf32Q8N8J7 132 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 FAM200AQ8TCP9 573 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 TCHPQ9BT92 498 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 ATXN3LQ9H3M9 355 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 KMT5AQ9NQR1 393 aa16.78■□□□□ 0.28
SSR4-204ENST00000370087 ZNF638Q14966 1978 aaKnown RBP16.77■□□□□ 0.28
SSR4-204ENST00000370087 OTOL1A6NHN0 477 aaPredicted RBP16.77■□□□□ 0.28
SSR4-204ENST00000370087 PP2D1A8MPX8 630 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 C1QTNF9BB2RNN3 333 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 C1QTNF9P0C862 333 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 MUTP22033 750 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 GABRR2P28476 465 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.28
SSR4-204ENST00000370087 GPR17Q13304 367 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 DMP1Q13316 513 aaPredicted RBP16.77■□□□□ 0.28
SSR4-204ENST00000370087 PLD1Q13393 1074 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 TRIM29Q14134 588 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.28
SSR4-204ENST00000370087 HAUS3Q68CZ6 603 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 NAIF1Q69YI7 327 aaPredicted RBP16.77■□□□□ 0.28
SSR4-204ENST00000370087 PSAPL1Q6NUJ1 521 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 CACNA2D4Q7Z3S7 1137 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 KCNK18Q7Z418 384 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 PSMG2Q969U7 264 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 LOXL4Q96JB6 756 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 LPIN3Q9BQK8 851 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 LSM14BQ9BX40 385 aaKnown RBP16.77■□□□□ 0.28
SSR4-204ENST00000370087 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
SSR4-204ENST00000370087 AKAP13Q12802 2813 aa16.77■□□□□ 0.27
SSR4-204ENST00000370087 SFI1A8K8P3 1242 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 GIPC1O14908 333 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 PROS1P07225 676 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 LRPAP1P30533 357 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 MPLP40238 635 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 ALDH1A3P47895 512 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSR4-204ENST00000370087 SYNPOQ8N3V7 929 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 RIN3Q8TB24 985 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 BPIFB1Q8TDL5 484 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 HPS4Q9NQG7 708 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 OBP2AQ9NY56 170 aa16.76■□□□□ 0.27
SSR4-204ENST00000370087 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
SSR4-204ENST00000370087 FAM208BQ5VWN6 2430 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms