RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SV2CQ496J9 727 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ARL8AQ96BM9 186 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ACSF2Q96CM8 615 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 THAP9Q9H5L6 903 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ALG13Q9NP73 1137 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ERAP1Q9NZ08 941 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 SUN2Q9UH99 717 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 MAGI2Q86UL8 1455 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 PGRMC1O00264 195 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 URODP06132 367 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 CYP2C8P10632 490 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 VCAM1P19320 739 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TBXAS1P24557 533 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 AVPR1AP37288 418 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 NAALADL2Q58DX5 795 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 RRM2BQ7LG56 351 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 OOSP2Q86WS3 158 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 PPM1NQ8N819 430 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 C1orf54Q8WWF1 131 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 RFT1Q96AA3 541 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 MCEEQ96PE7 176 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 COLEC11Q9BWP8 271 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TRPV6Q9H1D0 765 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 MID2Q9UJV3 735 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TRIM33Q9UPN9 1127 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TCHHQ07283 1943 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TEX33O43247 280 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ASS1P00966 412 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 VEGFAP15692 232 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 GUCY1A2P33402 732 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 NOTUMQ6P988 496 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TBC1D19Q8N5T2 526 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ICA1LQ8NDH6 482 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 CD274Q9NZQ7 290 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 TRIM10Q9UDY6 481 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 PRR12Q9ULL5 1215 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 CPSF1Q10570 1443 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ABCC3O15438 1527 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 A0A0G2JND7 137 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 EIF4E1BA6NMX2 242 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 NDUFS2O75306 463 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 HSPA9P38646 679 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 KRT72Q14CN4 511 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 ZC2HC1CQ53FD0 456 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 NOL9Q5SY16 702 aaKnown RBP7.4□□□□□ -1.22
SPTA1-201ENST00000368147 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 MIB1Q86YT6 1006 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 FBXO28Q9NVF7 368 aa7.4□□□□□ -1.22
SPTA1-201ENST00000368147 MYPNQ86TC9 1320 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 RGS20O76081 388 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 CKMP06732 381 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 FGFR1P11362 822 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 HSD17B4P51659 736 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 RUNX1T1Q06455 604 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 PTRHD1Q6GMV3 140 aaKnown RBP7.4□□□□□ -1.23
SPTA1-201ENST00000368147 CCDC149Q6ZUS6 474 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 RABGGTAQ92696 567 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 STAMBPL1Q96FJ0 436 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 KIAA1586Q9HCI6 787 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 GID8Q9NWU2 228 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 NSMCE4AQ9NXX6 385 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 RAB23Q9ULC3 237 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 MORC2Q9Y6X9 1032 aaPredicted RBP7.4□□□□□ -1.23
SPTA1-201ENST00000368147 EEF2KO00418 725 aaKnown RBP7.4□□□□□ -1.23
SPTA1-201ENST00000368147 B3GAT3O94766 335 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 ERVK-10P10266 1014 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 ODC1P11926 461 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 KLHL12Q53G59 568 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 PALB2Q86YC2 1186 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 CRAMP1Q96RY5 1269 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 FOXP3Q9BZS1 431 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 LATS2Q9NRM7 1088 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.4□□□□□ -1.23
SPTA1-201ENST00000368147 IP6K2Q9UHH9 426 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 SYNPO2Q9UMS6 1093 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 CLASP1Q7Z460 1538 aa7.4□□□□□ -1.23
SPTA1-201ENST00000368147 NDUFS3O75489 264 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 GRK2P25098 689 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 HMOX2P30519 316 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PPP4R3CPQ6ZMV5 832 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PHACTR4Q8IZ21 702 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 SRBD1Q8N5C6 995 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CINPQ9BW66 212 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ADA2Q9NZK5 511 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NDOR1Q9UHB4 597 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 MAD2L2Q9UI95 211 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 SCAMP3O14828 347 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NCK2O43639 380 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 TRIM13O60858 407 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 RNASEH1O60930 286 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CHGBP05060 677 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 IMPDH2P12268 514 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 GPC5P78333 572 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 MMS22LQ6ZRQ5 1243 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 UNC13DQ70J99 1090 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CRLF3Q8IUI8 442 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ZNF614Q8N883 585 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 IPMKQ8NFU5 416 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms