RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 FBXL5Q9UKA1 691 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 FBXW11Q9UKB1 542 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 MAFFQ9ULX9 164 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 USTQ9Y2C2 406 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 NR2E1Q9Y466 385 aa10.65□□□□□ -0.7
CD48-202ENST00000368046 TIMM13Q9Y5L4 95 aaPredicted RBP10.65□□□□□ -0.7
CD48-202ENST00000368046 BDP1A6H8Y1 2624 aa10.65□□□□□ -0.71
CD48-202ENST00000368046 KPNA7A9QM74 516 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 EXOC3O60645 756 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 ELF1P32519 619 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 PNPLA4P41247 253 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 ARPP19P56211 112 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 RBP5P82980 135 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 ROR1Q01973 937 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 FAM160A1Q05DH4 1040 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
CD48-202ENST00000368046 DUOXA2Q1HG44 320 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 PPM1LQ5SGD2 360 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 LIN9Q5TKA1 542 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 CCDC149Q6ZUS6 474 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 SLC9A9Q8IVB4 645 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 ELOA2Q8IYF1 753 aaPredicted RBP10.64□□□□□ -0.71
CD48-202ENST00000368046 CSGALNACT2Q8N6G5 542 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 SMG7Q92540 1137 aaKnown RBP10.64□□□□□ -0.71
CD48-202ENST00000368046 ZNF707Q96C28 371 aaPredicted RBP10.64□□□□□ -0.71
CD48-202ENST00000368046 MFSD14AQ96MC6 490 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 EPHX3Q9H6B9 360 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 PIDD1Q9HB75 910 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 WDR6Q9NNW5 1121 aaKnown RBP10.64□□□□□ -0.71
CD48-202ENST00000368046 INTS13Q9NVM9 706 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 DMAC2Q9NW81 257 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 AGAP1Q9UPQ3 857 aa10.64□□□□□ -0.71
CD48-202ENST00000368046 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
CD48-202ENST00000368046 BRWD1Q9NSI6 2320 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 TCF20Q9UGU0 1960 aaKnown RBP10.63□□□□□ -0.71
CD48-202ENST00000368046 WDR27A2RRH5 827 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 CYB561D2O14569 222 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 PRPF40AO75400 957 aaKnown RBP10.63□□□□□ -0.71
CD48-202ENST00000368046 ITGB3P05106 788 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 CYP11A1P05108 521 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 C8AP07357 584 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 TMEM191BP0C7N4 346 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 ODC1P11926 461 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 TNNI1P19237 187 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 HOXA9P31269 272 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 CYP2J2P51589 502 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 PTPN5P54829 565 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 MYBPC2Q14324 1141 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 PSMD6Q15008 389 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 SV2CQ496J9 727 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 OVOS1Q6IE37 1185 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 OTOP3Q7RTS5 596 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 WDR49Q8IV35 697 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 TCEAL8Q8IYN2 117 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 ZDHHC14Q8IZN3 488 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 THEM5Q8N1Q8 247 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 GUF1Q8N442 669 aaKnown RBP10.63□□□□□ -0.71
CD48-202ENST00000368046 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 C1orf127Q8N9H9 656 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 CXorf38Q8TB03 319 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 FEZF2Q8TBJ5 459 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 ACSF2Q96CM8 615 aaPredicted RBP10.63□□□□□ -0.71
CD48-202ENST00000368046 ANKRD36BP1Q96IX9 119 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 FNBP1Q96RU3 617 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 C1QTNF1Q9BXJ1 281 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 KCTD10Q9H3F6 313 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 AFF4Q9UHB7 1163 aaKnown RBP10.63□□□□□ -0.71
CD48-202ENST00000368046 HOOK1Q9UJC3 728 aaKnown RBP10.63□□□□□ -0.71
CD48-202ENST00000368046 ITGA11Q9UKX5 1188 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 DSEQ9UL01 958 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 TRAF3IP3Q9Y228 551 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 TTC28Q96AY4 2481 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
CD48-202ENST00000368046 OR6C75A6NL08 312 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 C2CD4DB7Z1M9 353 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 DCXO43602 365 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 CALUO43852 315 aaPredicted RBP10.62□□□□□ -0.71
CD48-202ENST00000368046 XYLBO75191 536 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 SMC2O95347 1197 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 CST3P01034 146 aaPredicted RBP10.62□□□□□ -0.71
CD48-202ENST00000368046 TNNC2P02585 160 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 KRT19P08727 400 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 POU2F2P09086 479 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 POLR2BP30876 1174 aaKnown RBP10.62□□□□□ -0.71
CD48-202ENST00000368046 GPR17Q13304 367 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 PNOCQ13519 176 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 DPH6Q7L8W6 267 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 TRAPPC11Q7Z392 1133 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 METTL23Q86XA0 190 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 OR5B17Q8NGF7 314 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 SPATA20Q8TB22 786 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 SLC7A14Q8TBB6 771 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 CCDC127Q96BQ5 260 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 ZNF560Q96MR9 790 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 CYP4F11Q9HBI6 524 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 RMND1Q9NWS8 449 aa10.62□□□□□ -0.71
CD48-202ENST00000368046 CUL9Q8IWT3 2517 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms