RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 ARHGEF28Q8N1W1 1705 aaKnown RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 DDX3XO00571 662 aaKnown RBP eCLIP12.04□□□□□ -0.48
RD3-201ENST00000367002 NPTX2P47972 431 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 CYP4A22Q5TCH4 519 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 PRAMEF18Q5VWM3 479 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 KIAA1841Q6NSI8 718 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 BTNL9Q6UXG8 535 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 SV2AQ7L0J3 742 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 TSEN2Q8NCE0 465 aaKnown RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 PPLO60437 1756 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 CUL2Q13617 745 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 SLC47A2Q86VL8 602 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 CEP70Q8NHQ1 597 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 TTC8Q8TAM2 541 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 CXorf38Q8TB03 319 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 PAK5Q9P286 719 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 SIK3Q9Y2K2 1263 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 ATP8B3O60423 1300 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 GSTA4O15217 222 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 PJA2O43164 708 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 AARSP49588 968 aaKnown RBP eCLIP12.03□□□□□ -0.48
RD3-201ENST00000367002 OVGP1Q12889 678 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 ICA1LQ8NDH6 482 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 TNIP3Q96KP6 325 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 ITSN1Q15811 1721 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 CCDC78A2IDD5 438 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 PPP1R12AO14974 1030 aaPredicted RBP12.03□□□□□ -0.48
RD3-201ENST00000367002 MOCS2O96007 188 aaPredicted RBP12.03□□□□□ -0.48
RD3-201ENST00000367002 CPA2P48052 419 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 ARID3BQ8IVW6 561 aaPredicted RBP12.03□□□□□ -0.48
RD3-201ENST00000367002 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 FAM49BQ9NUQ9 324 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 LOC100653049A0A140TA62 436 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 RCCD1A6NED2 376 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 EPHB6O15197 1021 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 KLRC4O43908 158 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 KRT34O76011 436 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 PDGFRBP09619 1106 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 PRAMEP78395 509 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 LRRC6Q86X45 466 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 XAB2Q9HCS7 855 aaKnown RBP12.03□□□□□ -0.48
RD3-201ENST00000367002 CNOT7Q9UIV1 285 aaKnown RBP12.03□□□□□ -0.48
RD3-201ENST00000367002 ORC6Q9Y5N6 252 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 NVLO15381 856 aaKnown RBP12.03□□□□□ -0.48
RD3-201ENST00000367002 MGEA5O60502 916 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 SPAG6O75602 509 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 ICAM1P05362 532 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 SERPINB4P48594 390 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 KCNMA1Q12791 1236 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 KCNT1Q5JUK3 1230 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 STAMBPL1Q96FJ0 436 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 CLMNQ96JQ2 1002 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 PPP1R36Q96LQ0 422 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 MANSC1Q9H8J5 431 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 KRT82Q9NSB4 513 aa12.03□□□□□ -0.48
RD3-201ENST00000367002 TRIM49D1C9J1S8 452 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 FAM86B1E9PN63 330 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 FAM86B2P0C5J1 330 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 GYS1P13807 737 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 TAL1P17542 331 aaPredicted RBP12.02□□□□□ -0.48
RD3-201ENST00000367002 TARSP26639 723 aaKnown RBP12.02□□□□□ -0.48
RD3-201ENST00000367002 SHMT1P34896 483 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 CTCFP49711 727 aaPredicted RBP12.02□□□□□ -0.48
RD3-201ENST00000367002 GEMIN4P57678 1058 aaKnown RBP12.02□□□□□ -0.48
RD3-201ENST00000367002 TMEM132DQ14C87 1099 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 STILQ15468 1287 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 TMEM119Q4V9L6 283 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 MICALL2Q8IY33 904 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 UBA3Q8TBC4 463 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 DNAJC9Q8WXX5 260 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 MMP19Q99542 508 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 NT5C1AQ9BXI3 368 aa12.02□□□□□ -0.48
RD3-201ENST00000367002 MTO1Q9Y2Z2 717 aaKnown RBP12.02□□□□□ -0.48
RD3-201ENST00000367002 SMAPO00193 183 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 MAP3K6O95382 1288 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 MUTP22033 750 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 ZNF844Q08AG5 666 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 Q4G0T1 1027 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 DNAL1Q4LDG9 190 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 FAXCQ5TGI0 409 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 MROH9Q5TGP6 573 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 TMC3Q7Z5M5 1100 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 SLC5A5Q92911 643 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 YY1AP1Q9H869 796 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 WHRNQ9P202 907 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 PHTF1Q9UMS5 762 aa12.02□□□□□ -0.49
RD3-201ENST00000367002 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms