RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 BICD1Q96G01 975 aa22.97■■□□□ 1.27
CD47-202ENST00000361309 CNTNAP3BQ96NU0 1288 aa22.97■■□□□ 1.27
CD47-202ENST00000361309 CNTNAP3Q9BZ76 1288 aa22.97■■□□□ 1.27
CD47-202ENST00000361309 UBQLN1Q9UMX0 589 aaKnown RBP22.97■■□□□ 1.27
CD47-202ENST00000361309 SCN1AP35498 2009 aa22.97■■□□□ 1.27
CD47-202ENST00000361309 DENND4CQ5VZ89 1909 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 NPHP3-ACAD11A0A0J9YXS1 232 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 DCDC2BA2VCK2 349 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 OR6C75A6NL08 312 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 SLC38A8A6NNN8 435 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 CHADO15335 359 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 CYP3A5P20815 502 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 SOX9P48436 509 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 AARSP49588 968 aaKnown RBP eCLIP22.96■■□□□ 1.27
CD47-202ENST00000361309 GUCY2FP51841 1108 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 SLC12A3P55017 1021 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 MLLT6P55198 1093 aaPredicted RBP22.96■■□□□ 1.27
CD47-202ENST00000361309 CACNB1Q02641 598 aaPredicted RBP22.96■■□□□ 1.27
CD47-202ENST00000361309 PPP2R3AQ06190 1150 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 GPR17Q13304 367 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 RTKNQ9BST9 563 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 RBM12Q9NTZ6 932 aaKnown RBP22.96■■□□□ 1.27
CD47-202ENST00000361309 SLC27A5Q9Y2P5 690 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 ATG2BQ96BY7 2078 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 SPAG17Q6Q759 2223 aa22.96■■□□□ 1.27
CD47-202ENST00000361309 LACTBL1A8MY62 500 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 ALDH1A3P47895 512 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 KPNA1P52294 538 aaPredicted RBP22.95■■□□□ 1.26
CD47-202ENST00000361309 CENPPQ6IPU0 288 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 SDK1Q7Z5N4 2213 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 ARID3BQ8IVW6 561 aaPredicted RBP22.95■■□□□ 1.26
CD47-202ENST00000361309 SPEM1Q8N4L4 309 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 MSANTD3Q96H12 275 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 C8orf33Q9H7E9 229 aaPredicted RBP22.95■■□□□ 1.26
CD47-202ENST00000361309 PPP4R2Q9NY27 417 aa22.95■■□□□ 1.26
CD47-202ENST00000361309 KMT2BQ9UMN6 2715 aaPredicted RBP22.95■■□□□ 1.26
CD47-202ENST00000361309 MTMR11A4FU01 709 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 CHURC1-FNTBB4DL54 471 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 PLA2G4BP0C869 781 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 FNTBP49356 437 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 NCKAP1LP55160 1127 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 DMWDQ09019 674 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 FCHO2Q0JRZ9 810 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 LRRC32Q14392 662 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 WDR44Q5JSH3 913 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 OVOS1Q6IE37 1185 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 ATAD1Q8NBU5 361 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 TMEM209Q96SK2 561 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 KCND2Q9NZV8 630 aa22.94■■□□□ 1.26
CD47-202ENST00000361309 LARSQ9P2J5 1176 aaKnown RBP22.94■■□□□ 1.26
CD47-202ENST00000361309 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.94■■□□□ 1.26
CD47-202ENST00000361309 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.94■■□□□ 1.26
CD47-202ENST00000361309 H0YCG3 227 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 PPEF2O14830 753 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 XPOTO43592 962 aaKnown RBP22.93■■□□□ 1.26
CD47-202ENST00000361309 SOAT2O75908 522 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 RETP07949 1114 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 TYMPP19971 482 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 ATP2C1P98194 919 aaPredicted RBP22.93■■□□□ 1.26
CD47-202ENST00000361309 SIM2Q14190 667 aaPredicted RBP22.93■■□□□ 1.26
CD47-202ENST00000361309 MYBPC2Q14324 1141 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 ENOX2Q16206 610 aaKnown RBP22.93■■□□□ 1.26
CD47-202ENST00000361309 ARSHQ5FYA8 562 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 MCTP1Q6DN14 999 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 C1orf228Q6PIY5 440 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 GAREM2Q75VX8 874 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 HAUS6Q7Z4H7 955 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 DNAJB7Q7Z6W7 309 aaPredicted RBP22.93■■□□□ 1.26
CD47-202ENST00000361309 KCTD17Q8N5Z5 321 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 TTC9BQ8N6N2 239 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 TTC8Q8TAM2 541 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 CDK5RAP3Q96JB5 506 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 ZFYVE19Q96K21 471 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 LRRC3BQ96PB8 259 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 MKNK1Q9BUB5 465 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 RPF1Q9H9Y2 349 aaKnown RBP22.93■■□□□ 1.26
CD47-202ENST00000361309 ASB3Q9Y575 518 aa22.93■■□□□ 1.26
CD47-202ENST00000361309 VWA3AA6NCI4 1184 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 SPECC1L-ADORA2AF8WAN1 911 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 HRO43593 1189 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 FAM189A1O60320 539 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 LIG4P49917 911 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 SRSF5Q13243 272 aaKnown RBP22.92■■□□□ 1.26
CD47-202ENST00000361309 KYAT1Q16773 422 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 TXNDC11Q6PKC3 985 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 Q6ZS52 159 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 PSMG2Q969U7 264 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 ATXN3LQ9H3M9 355 aa22.92■■□□□ 1.26
CD47-202ENST00000361309 GREB1Q4ZG55 1949 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 MYBPHLA2RUH7 354 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 K7ESF4 209 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 DPYSL4O14531 572 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 HNRNPDLO14979 420 aaKnown RBP22.91■■□□□ 1.26
CD47-202ENST00000361309 OGTO15294 1046 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 LRP3O75074 770 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 GABRR2P28476 465 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 CTHP32929 405 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 LILRA4P59901 499 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 TMEM119Q4V9L6 283 aa22.91■■□□□ 1.26
CD47-202ENST00000361309 RILPL1Q5EBL4 403 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms