RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
UBA3-202ENST00000361055 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBA3-202ENST00000361055 FLRT1Q9NZU1 646 aa13.19□□□□□ -0.3
UBA3-202ENST00000361055 MYH11P35749 1972 aa13.19□□□□□ -0.3
UBA3-202ENST00000361055 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
UBA3-202ENST00000361055 CLDN3O15551 220 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 ARIH2O95376 493 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 TTC4O95801 387 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 CCNE2O96020 404 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 GNRH1P01148 92 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
UBA3-202ENST00000361055 HOXD10P28358 340 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 CNGA1P29973 690 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 FLT3LGP49771 235 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 RIPK1Q13546 671 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 ACVR2BQ13705 512 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 PTK6Q13882 451 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 CCL14Q16627 93 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 ARHGEF2Q92974 986 aaKnown RBP13.18□□□□□ -0.3
UBA3-202ENST00000361055 SNF8Q96H20 258 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 GABRQQ9UN88 632 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 FKTNO75072 461 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBA3-202ENST00000361055 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
UBA3-202ENST00000361055 IGHA2P01877 340 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 PSMC5P62195 406 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 KRT17Q04695 432 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 PRKCZQ05513 592 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 METTL7BQ6UX53 244 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 ATL2Q8NHH9 583 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 C1orf54Q8WWF1 131 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 POP1Q99575 1024 aaKnown RBP13.18□□□□□ -0.3
UBA3-202ENST00000361055 PLCD4Q9BRC7 762 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
UBA3-202ENST00000361055 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 MYBL1P10243 752 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 SCP2P22307 547 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 CAP1Q01518 475 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 GCNT1Q02742 428 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 CELF3Q5SZQ8 465 aaKnown RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 CCDC63Q8NA47 563 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 CCDC127Q96BQ5 260 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBA3-202ENST00000361055 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 GAS8O95995 478 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 UNGP13051 313 aaPredicted RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 NPTX2P47972 431 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 ACTR2P61160 394 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 CENPCQ03188 943 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 LONRF1Q17RB8 773 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 FAM102BQ5T8I3 360 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 HIBCHQ6NVY1 386 aaPredicted RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 SV2AQ7L0J3 742 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 MCOLN2Q8IZK6 566 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 GBP7Q8N8V2 638 aaPredicted RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 BBOF1Q8ND07 529 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 TAS1R2Q8TE23 839 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
UBA3-202ENST00000361055 TRAIPQ9BWF2 469 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 C17orf75Q9HAS0 396 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 ASIC3Q9UHC3 531 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
UBA3-202ENST00000361055 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 SORBS3O60504 671 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 ATG7O95352 703 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 PSAPP07602 524 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 DLATP10515 647 aaKnown RBP13.16□□□□□ -0.3
UBA3-202ENST00000361055 ADCYAP1R1P41586 468 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 IFNAR2P48551 515 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 BPIFB4P59827 614 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 SP4Q02446 784 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 CYP24A1Q07973 514 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 GALNTL6Q49A17 601 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 CCDC38Q502W7 563 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 CRELD2Q6UXH1 353 aaPredicted RBP13.16□□□□□ -0.3
UBA3-202ENST00000361055 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 CKAP2Q8WWK9 683 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 SAAL1Q96ER3 474 aa13.16□□□□□ -0.3
UBA3-202ENST00000361055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBA3-202ENST00000361055 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms