RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 NOP9Q86U38 636 aaKnown RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 VPS36Q86VN1 386 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 RPUSD2Q8IZ73 545 aaKnown RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 C17orf53Q8N3J3 647 aaPredicted RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 LRFN2Q9ULH4 789 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 NENFQ9UMX5 172 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 SNX9Q9Y5X1 595 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 A0A087X0T9 212 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 FAM228BP0C875 321 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 CD58P19256 250 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 RAP1GAPP47736 663 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 CLCNKBP51801 687 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 CDH8P55286 799 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 ACRBPQ8NEB7 543 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 SLC30A5Q8TAD4 765 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 DDX1Q92499 740 aaKnown RBP26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 AGPAT1Q99943 283 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 ACP6Q9NPH0 428 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 TBC1D13Q9NVG8 400 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 ADAMTS1Q9UHI8 967 aa26.59■■□□□ 1.85
SHARPIN-201ENST00000359551 CILPO75339 1184 aa26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 PDE6CP51160 858 aa26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 KRT83P78385 493 aa26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 GFPT1Q06210 699 aaPredicted RBP26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 SLC20A1Q8WUM9 679 aa26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 CASD1Q96PB1 797 aa26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 CACNG4Q9UBN1 327 aa26.58■■□□□ 1.85
SHARPIN-201ENST00000359551 CASTOR2A6NHX0 329 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 DDX3XO00571 662 aaKnown RBP eCLIP26.57■■□□□ 1.849e-12■■■■□ 20.3
SHARPIN-201ENST00000359551 CCP110O43303 1012 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 ZSCAN12O43309 604 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 ZNF677Q86XU0 584 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 LNX1Q8TBB1 728 aaPredicted RBP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 WHAMMQ8TF30 809 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 MMS19Q96T76 1030 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 USP27XA6NNY8 438 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 ZNF500O60304 480 aaPredicted RBP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 EFCAB14O75071 495 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 IPO7O95373 1038 aaKnown RBP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 CHRNB2P17787 502 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 PAX3P23760 479 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 AARSP49588 968 aaKnown RBP eCLIP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 CDR2Q01850 454 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 SOWAHAQ2M3V2 549 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 DPH6Q7L8W6 267 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 ABI1Q8IZP0 508 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 C3orf58Q8NDZ4 430 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 PAAF1Q9BRP4 392 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 IL23AQ9NPF7 189 aa26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 BARX2Q9UMQ3 279 aaPredicted RBP26.57■■□□□ 1.84
SHARPIN-201ENST00000359551 MKI67P46013 3256 aaKnown RBP26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 TACC1O75410 805 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 DDHD2O94830 711 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 FAM163BP0C2L3 166 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 CYP27A1Q02318 531 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 SPA17Q15506 151 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 REXO1L1PQ8IX06 675 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 COLGALT2Q8IYK4 626 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 TOP6BLQ8N6T0 577 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 TSC2P49815 1807 aa26.56■■□□□ 1.84
SHARPIN-201ENST00000359551 COL4A6Q14031 1691 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 PTPRSQ13332 1948 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 B4GALT3O60512 393 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 TNFAIP3P21580 790 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 FMO1Q01740 532 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 ZNF280BQ86YH2 543 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 GLYCTKQ8IVS8 523 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 PPP1R13BQ96KQ4 1090 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 PRKAG2Q9UGJ0 569 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 NAGPAQ9UK23 515 aa26.55■■□□□ 1.84
SHARPIN-201ENST00000359551 PAEPP09466 180 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 IGFBP6P24592 240 aaPredicted RBP26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 GNA15P30679 374 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 RAD23BP54727 409 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 CD300LGQ6UXG3 332 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 MRPL9Q9BYD2 267 aaKnown RBP26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 TRMT1Q9NXH9 659 aaKnown RBP26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 BAIAP3O94812 1187 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 C10orf76Q5T2E6 689 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 DCLRE1AQ6PJP8 1040 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 ZNF662Q6ZS27 426 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 KBTBD7Q8WVZ9 684 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 TWNKQ96RR1 684 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 MRPL45Q9BRJ2 306 aaKnown RBP26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 ELOVL4Q9GZR5 314 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 L1RE1Q9UN81 338 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 PCDHA13Q9Y5I0 950 aa26.54■■□□□ 1.84
SHARPIN-201ENST00000359551 ATP8B3O60423 1300 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 TMEM189-UBE2V1I3L0A0 370 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 MMEP08473 750 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 GATMP50440 423 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 PPIGQ13427 754 aaKnown RBP eCLIP26.53■■□□□ 1.841e-7■■□□□ 14
SHARPIN-201ENST00000359551 UNC93AQ86WB7 457 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 SLC4A11Q8NBS3 891 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 APPL2Q8NEU8 664 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 TOP1MTQ969P6 601 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 HMGXB4Q9UGU5 601 aa26.53■■□□□ 1.84
SHARPIN-201ENST00000359551 HUS1O60921 280 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms