RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CHN1P15882 459 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 ACO1P21399 889 aaKnown RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 MARK3P27448 753 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 SLCO1A2P46721 670 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 PLCB3Q01970 1234 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CDC42EP4Q9H3Q1 356 aaKnown RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 SMARCAD1Q9H4L7 1026 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 RPF1Q9H9Y2 349 aaKnown RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 NUB1Q9Y5A7 615 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CAPN7Q9Y6W3 813 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 TCRBV7S2A1N4TA0A589 114 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 ITGA8P53708 1063 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 TNFAIP2Q03169 654 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 NFX1Q12986 1120 aaKnown RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 LRRC38Q5VT99 294 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 MPZL3Q6UWV2 235 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 RNF25Q96BH1 459 aaPredicted RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 ELMO3Q96BJ8 720 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CFAP57Q96MR6 1250 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 TTC25Q96NG3 672 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 MIS12Q9H081 205 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 SHBGP04278 402 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 KRT19P08727 400 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 ATP4AP20648 1035 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 LAMTOR4Q0VGL1 99 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 TRIP13Q15645 432 aaPredicted RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 ZNF667Q5HYK9 610 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 IZUMO3Q5VZ72 239 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CRELD2Q6UXH1 353 aaPredicted RBP9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 RHPN2Q8IUC4 686 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 SPATA33Q96N06 139 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CHST7Q9NS84 486 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 WDR35Q9P2L0 1181 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CNTN6Q9UQ52 1028 aa9.86□□□□□ -0.83
GTF3C2-202ENST00000359541 CXCL11O14625 94 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 HBP1O60381 514 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 USP2O75604 605 aaPredicted RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 TTLL4Q14679 1199 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 STAT4Q14765 748 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 SIX1Q15475 284 aaPredicted RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 TARBP2Q15633 366 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 KYAT1Q16773 422 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 MFSD5Q6N075 450 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 PLPPR4Q7Z2D5 763 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 OR5B17Q8NGF7 314 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ATG4AQ8WYN0 398 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 NLRP4Q96MN2 994 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 MMP19Q99542 508 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 MTMR12Q9C0I1 747 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 APOBEC3GQ9HC16 384 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 KCNK9Q9NPC2 374 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 SNCAIPQ9Y6H5 919 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 TTC4O95801 387 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 KRT7P08729 469 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 MMP8P22894 467 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 EIF4BP23588 611 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 EDNRBP24530 442 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 MMP13P45452 471 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 PHKA2P46019 1235 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 NR1H3Q13133 447 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ERMARDQ5T6L9 678 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ATF7IP2Q5U623 682 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 KAZNQ674X7 775 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 APBB1IPQ7Z5R6 666 aaPredicted RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ERO1BQ86YB8 467 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 THNSL1Q8IYQ7 743 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 OTUD5Q96G74 571 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ACO2Q99798 780 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ADARB2Q9NS39 739 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 CISHQ9NSE2 258 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 PLCB4Q15147 1175 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 TREML2Q5T2D2 321 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ANKRD13AQ8IZ07 590 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 RIBC1Q8N443 379 aaPredicted RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 EPS8L3Q8TE67 593 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 SEC16BQ96JE7 1060 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 MCEEQ96PE7 176 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 CNTNAP2Q9UHC6 1331 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 FER1L6Q2WGJ9 1857 aa9.85□□□□□ -0.83
GTF3C2-202ENST00000359541 LRRD1A4D1F6 860 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 CDH16O75309 829 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 CPP00450 1065 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 CALCAP01258 141 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 MYL6P60660 151 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 C2CD6Q53TS8 623 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 GPAT2Q6NUI2 795 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 FASTKD5Q7L8L6 764 aaKnown RBP9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 TTC39CQ8N584 583 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 PAF1Q8N7H5 531 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 FRMD8P1Q9BZ68 369 aaPredicted RBP9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 DNAI2Q9GZS0 605 aa9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 PRMT7Q9NVM4 692 aaPredicted RBP9.84□□□□□ -0.83
GTF3C2-202ENST00000359541 ADGRA2Q96PE1 1338 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms