RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 RECQL4O94761 1208 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 TIMP1P01033 207 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 CHRNA1P02708 482 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 CYP1A1P04798 512 aaPredicted RBP14.4□□□□□ -0.1
CCDC197-201ENST00000359253 MMEP08473 750 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 UNGP13051 313 aaPredicted RBP14.4□□□□□ -0.1
CCDC197-201ENST00000359253 PAX3P23760 479 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 ASPAP45381 313 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 TNNC1P63316 161 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 CENPCQ03188 943 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 WDR72Q3MJ13 1102 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 C7orf61Q8IZ16 206 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 TPCN2Q8NHX9 752 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 PCDHB18PQ96TA0 734 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 ARID3AQ99856 593 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 UBN1Q9NPG3 1134 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 AVENQ9NQS1 362 aaPredicted RBP14.4□□□□□ -0.1
CCDC197-201ENST00000359253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC197-201ENST00000359253 SLC38A7Q9NVC3 462 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 SALL4Q9UJQ4 1053 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 TBX21Q9UL17 535 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 PCDHGC3Q9UN70 934 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 IPPQ9Y573 584 aa14.4□□□□□ -0.1
CCDC197-201ENST00000359253 BUB1O43683 1085 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
CCDC197-201ENST00000359253 ATP1A1P05023 1023 aaKnown RBP14.39□□□□□ -0.11
CCDC197-201ENST00000359253 CYP1A2P05177 515 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 POLR2BP30876 1174 aaKnown RBP14.39□□□□□ -0.11
CCDC197-201ENST00000359253 THPOP40225 353 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 STILQ15468 1287 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 MEI1Q5TIA1 1274 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 TAF3Q5VWG9 929 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 MRPL10Q7Z7H8 261 aaKnown RBP14.39□□□□□ -0.11
CCDC197-201ENST00000359253 SLC35G2Q8TBE7 412 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 CAGE1Q8TC20 777 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 ZNF606Q8WXB4 792 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 ZNF560Q96MR9 790 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
CCDC197-201ENST00000359253 PARP2Q9UGN5 583 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 GIT1Q9Y2X7 761 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
CCDC197-201ENST00000359253 TRIP12Q14669 1992 aaPredicted RBP14.39□□□□□ -0.11
CCDC197-201ENST00000359253 DNAH12Q6ZR08 3092 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 CITO14578 2027 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 SMIM28A0A1B0GU29 152 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 GRID2IPA4D2P6 1211 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 TRIM43BA6NCK2 446 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 TMCO5BA8MYB1 307 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 H0YGN5 161 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 THAP12O43422 761 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 ITGA4P13612 1032 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 RAG1P15918 1043 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 BMP8BP34820 402 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 ITIH3Q06033 890 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 INCA1Q0VD86 236 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PAK2Q13177 524 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 BFSP2Q13515 415 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 CLUL1Q15846 466 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 LIN9Q5TKA1 542 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PRPF38BQ5VTL8 546 aaKnown RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 C11orf63Q6NUN7 778 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 DPH6Q7L8W6 267 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PHF13Q86YI8 300 aaPredicted RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 LRRC57Q8N9N7 239 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 TMEM35BQ8NCS4 154 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PPP1R13LQ8WUF5 828 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 UBXN4Q92575 508 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 TRIM43Q96BQ3 446 aaPredicted RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PGBD4Q96DM1 585 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 PBKQ96KB5 322 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 FAM84AQ96KN4 292 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 CARD6Q9BX69 1037 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 THAP2Q9H0W7 228 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 TRPV6Q9H1D0 765 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 LHX5Q9H2C1 402 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 NXF3Q9H4D5 531 aaKnown RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 ERVK-5Q9HDB9 667 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 FAM105AQ9NUU6 356 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 BARX2Q9UMQ3 279 aaPredicted RBP14.38□□□□□ -0.11
CCDC197-201ENST00000359253 UMODL1Q5DID0 1318 aa14.38□□□□□ -0.11
CCDC197-201ENST00000359253 CTAGE15A4D2H0 777 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 PIRO00625 290 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 TUBBP07437 444 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 CTAGE8P0CG41 777 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 ABCB4P21439 1286 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 LRPAP1P30533 357 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
CCDC197-201ENST00000359253 PAFAH1B1P43034 410 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 NFX1Q12986 1120 aaKnown RBP14.37□□□□□ -0.11
CCDC197-201ENST00000359253 RPS6KA1Q15418 735 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 C9orf57Q5W0N0 161 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 MFSD5Q6N075 450 aa14.37□□□□□ -0.11
CCDC197-201ENST00000359253 ZNF572Q7Z3I7 529 aaPredicted RBP14.37□□□□□ -0.11
CCDC197-201ENST00000359253 CTAGE6Q86UF2 777 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms