RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SH3RF1Q7Z6J0 888 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 ARID3BQ8IVW6 561 aaPredicted RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 CDC42EP4Q9H3Q1 356 aaKnown RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 SARS2Q9NP81 518 aaKnown RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 PAK5Q9P286 719 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 POLLQ9UGP5 575 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 SERPINB4P48594 390 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 SNRPFP62306 86 aaKnown RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 NCLNQ969V3 563 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 DACT3Q96B18 629 aaPredicted RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 ATG4CQ96DT6 458 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 POP1Q99575 1024 aaKnown RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 ZBTB18Q99592 522 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 KIF9Q9HAQ2 790 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 E2F8A0AVK6 867 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 ZBTB7AO95365 584 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 MCF2P10911 925 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 TARSP26639 723 aaKnown RBP14.39□□□□□ -0.11
VCP-201ENST00000358901 SCTRP47872 440 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 PRAMEF18Q5VWM3 479 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 CREG2Q8IUH2 290 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 THEM5Q8N1Q8 247 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 TAS1R2Q8TE23 839 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 DNAJC9Q8WXX5 260 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 IFT43Q96FT9 208 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 MMP19Q99542 508 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 AIPL1Q9NZN9 384 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 FRMPD1Q5SYB0 1578 aa14.39□□□□□ -0.11
VCP-201ENST00000358901 SNX2O60749 519 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 CSPG5O95196 566 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 PYGBP11216 843 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 GZMAP12544 262 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 DNAL1Q4LDG9 190 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 APOBEC3FQ8IUX4 373 aaKnown RBP14.38□□□□□ -0.11
VCP-201ENST00000358901 SPON2Q9BUD6 331 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MANSC1Q9H8J5 431 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MRPL40Q9NQ50 206 aaKnown RBP14.38□□□□□ -0.11
VCP-201ENST00000358901 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 CNTNAP4Q9C0A0 1308 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 SLIT1O75093 1534 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MAP3K6O95382 1288 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 ENO3P13929 434 aaPredicted RBP14.38□□□□□ -0.11
VCP-201ENST00000358901 TSPY1Q01534 308 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 BIRC2Q13490 618 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MED21Q13503 144 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 TMEM132DQ14C87 1099 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MROH9Q5TGP6 573 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 ZNF280CQ8ND82 737 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 UBA3Q8TBC4 463 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 FAM237AA0A1B0GTK4 181 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 TRIM49D1C9J1S8 452 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 TPI1P60174 286 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 ZBTB41Q5SVQ8 909 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 CYP2W1Q8TAV3 490 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 BLOC1S4Q9NUP1 217 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MTO1Q9Y2Z2 717 aaKnown RBP14.38□□□□□ -0.11
VCP-201ENST00000358901 MAFGO15525 162 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 CYTH3O43739 400 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 CUL2Q13617 745 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 TRIP10Q15642 601 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 MEA1Q16626 185 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 TEDDM1Q5T9Z0 273 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 FOXR1Q6PIV2 292 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 C3orf67Q6ZVT6 689 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 EHD4Q9H223 541 aa14.38□□□□□ -0.11
VCP-201ENST00000358901 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 UBA6A0AVT1 1052 aaPredicted RBP14.37□□□□□ -0.11
VCP-201ENST00000358901 PDE2AO00408 941 aaPredicted RBP14.37□□□□□ -0.11
VCP-201ENST00000358901 CTCFP49711 727 aaPredicted RBP14.37□□□□□ -0.11
VCP-201ENST00000358901 GEMIN4P57678 1058 aaKnown RBP14.37□□□□□ -0.11
VCP-201ENST00000358901 CYTH1Q15438 398 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 CNGA3Q16281 694 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 KCNT1Q5JUK3 1230 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 EPAS1Q99814 870 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 SPAG6O75602 509 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 RARBP10826 455 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 GNAT1P11488 350 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 SERPINB9P50453 376 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 PDCD2Q16342 344 aaPredicted RBP14.37□□□□□ -0.11
VCP-201ENST00000358901 TKFCQ3LXA3 575 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 FRA10AC1Q70Z53 315 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 LRRC6Q86X45 466 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 E2F7Q96AV8 911 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 NT5C1AQ9BXI3 368 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 PHTF1Q9UMS5 762 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 DFFAO00273 331 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 HSD17B4P51659 736 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
VCP-201ENST00000358901 LRRC8EQ6NSJ5 796 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms