RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ADAMTS4O75173 837 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 DUSP11O75319 330 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 VNN1O95497 513 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 UNGP13051 313 aaPredicted RBP15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 CDR1P51861 262 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 BPIFB4P59827 614 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 CAPSQ13938 189 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 HOOK3Q86VS8 718 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 CPNE8Q86YQ8 564 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 JAMLQ86YT9 394 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 MTUS1Q9ULD2 1270 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 GNEQ9Y223 722 aaKnown RBP15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 PCDHB2Q9Y5E7 798 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 PCDHA3Q9Y5H8 950 aa15.22■□□□□ 0.03
NIPAL3-203ENST00000358028 A0A0B4J269 797 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 MAFO75444 373 aaPredicted RBP15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 EDN1P05305 212 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 NUDT17P0C025 328 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 GUCY1A3Q02108 690 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 CYP1B1Q16678 543 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 ZBTB41Q5SVQ8 909 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 IQSEC1Q6DN90 963 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 ANKLE1Q8NAG6 615 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 PAWRQ96IZ0 340 aaKnown RBP15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 AVENQ9NQS1 362 aaPredicted RBP15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 PPME1Q9Y570 386 aa15.21■□□□□ 0.03
NIPAL3-203ENST00000358028 DNM1LO00429 736 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 FAM107AO95990 144 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 PAEPP09466 180 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 MYBL1P10243 752 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 TGFB3P10600 412 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 PYGMP11217 842 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 TCF7P36402 384 aaPredicted RBP15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 FLT3P36888 993 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 PTGIRP43119 386 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 PPP2R2AP63151 447 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 DUSP28Q4G0W2 176 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 METTL7BQ6UX53 244 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 YTHDF3Q7Z739 585 aaKnown RBP15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 TADA2BQ86TJ2 420 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 MCOLN2Q8IZK6 566 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 PRELID2Q8N945 189 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 COPS5Q92905 334 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 TRIM11Q96F44 468 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 FAM167AQ96KS9 214 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 PLVAPQ9BX97 442 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 TRIM31Q9BZY9 425 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 CNOT10Q9H9A5 744 aaKnown RBP15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 SLC12A6Q9UHW9 1150 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.02
NIPAL3-203ENST00000358028 CYP1A1P04798 512 aaPredicted RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 C6orf222P0C671 652 aaPredicted RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 RWDD2BP57060 319 aa15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 CUL2Q13617 745 aa15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 CCDC62Q6P9F0 684 aa15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 NLRP14Q86W24 1093 aa15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 SLC13A5Q86YT5 568 aaPredicted RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 C12orf50Q8NA57 414 aaPredicted RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 MAGOHBQ96A72 148 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 C18orf8Q96DM3 657 aa15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 PABPC3Q9H361 631 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 APOBEC3GQ9HC16 384 aaKnown RBP15.2■□□□□ 0.02
NIPAL3-203ENST00000358028 KIAA0754O94854 1291 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 CLTAP09496 248 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 TXNP10599 105 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 FNTAP49354 379 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 GJA9P57773 515 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 BEX3Q00994 111 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 TTLL4Q14679 1199 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 LY6KQ17RY6 165 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 ZDHHC14Q8IZN3 488 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 ARRDC4Q8NCT1 418 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 OR2W6PQ8NHA6 318 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 ZNF473Q8WTR7 871 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 GLG1Q92896 1179 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 TLCD1Q96CP7 247 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 CENPHQ9H3R5 247 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 AZI2Q9H6S1 392 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 MTRF1LQ9UGC7 380 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 ANAPC7Q9UJX3 599 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 PCDHB4Q9Y5E5 795 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 DYNC1LI2O43237 492 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 HARSP12081 509 aaKnown RBP15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 COL6A1P12109 1028 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 TBXAS1P24557 533 aaPredicted RBP15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 EFNA5P52803 228 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 PMS2P54278 862 aa15.19■□□□□ 0.02
NIPAL3-203ENST00000358028 CENPCQ03188 943 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms