RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ELAVL2Q12926 359 aaKnown RBP15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SOWAHAQ2M3V2 549 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 UVSSAQ2YD98 709 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 RTP2Q5QGT7 225 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 GJB7Q6PEY0 223 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SARM1Q6SZW1 724 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 CEP57Q86XR8 500 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 ARHGEF19Q8IW93 802 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 VPS52Q8N1B4 723 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 POF1BQ8WVV4 589 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 NT5C1BQ96P26 610 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 ERGIC2Q96RQ1 377 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 ARID3AQ99856 593 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 NIF3L1Q9GZT8 377 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 ZNF576Q9H609 170 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SMYD3Q9H7B4 428 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SIX2Q9NPC8 291 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 NLRC5Q86WI3 1866 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SPTBN5Q9NRC6 3674 aaKnown RBP15.94■□□□□ 0.14
CCNE1-202ENST00000357943 HUS1O60921 280 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 CSPG5O95196 566 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 ODC1P11926 461 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 FGFR3P22607 806 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 RAP1GAPP47736 663 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 CDH8P55286 799 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 GPM6BQ13491 265 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 USP41Q3LFD5 358 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 WSCD1Q658N2 575 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 RRAGAQ7L523 313 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 LIMS2Q7Z4I7 341 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 PPM1KQ8N3J5 372 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 PDCL2Q8N4E4 241 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 APPL2Q8NEU8 664 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 KAT5Q92993 513 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 LSM14BQ9BX40 385 aaKnown RBP15.94■□□□□ 0.14
CCNE1-202ENST00000357943 SDCBP2Q9H190 292 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 TTYH1Q9H313 450 aaPredicted RBP15.94■□□□□ 0.14
CCNE1-202ENST00000357943 CHST7Q9NS84 486 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 APEX2Q9UBZ4 518 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
CCNE1-202ENST00000357943 PCDHB8Q9UN66 801 aa15.94■□□□□ 0.14
CCNE1-202ENST00000357943 RFXAPO00287 272 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 SYN3O14994 580 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 EPHB6O15197 1021 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 WEE2P0C1S8 567 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 P4HA1P13674 534 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 MRE11P49959 708 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 ERVFC1P60507 584 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 CAMK1Q14012 370 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.93■□□□□ 0.14
CCNE1-202ENST00000357943 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 GDPD5Q8WTR4 605 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 KBTBD7Q8WVZ9 684 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 PCMTD1Q96MG8 357 aaPredicted RBP15.93■□□□□ 0.14
CCNE1-202ENST00000357943 MRPL45Q9BRJ2 306 aaKnown RBP15.93■□□□□ 0.14
CCNE1-202ENST00000357943 TTPALQ9BTX7 342 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 HERC2P3Q9BVR0 1158 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 BCO2Q9BYV7 579 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 GRPEL1Q9HAV7 217 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 UBE2TQ9NPD8 197 aaPredicted RBP15.93■□□□□ 0.14
CCNE1-202ENST00000357943 FAM207AQ9NSI2 230 aaPredicted RBP15.93■□□□□ 0.14
CCNE1-202ENST00000357943 AJAP1Q9UKB5 411 aaPredicted RBP15.93■□□□□ 0.14
CCNE1-202ENST00000357943 LZTS1Q9Y250 596 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 REV3LO60673 3130 aa15.93■□□□□ 0.14
CCNE1-202ENST00000357943 A0A1W2PQC6 194 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 C2CD2LO14523 706 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 CBFA2T2O43439 604 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 NOL4O94818 638 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 CYP11A1P05108 521 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 TYMPP19971 482 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 PBX1P40424 430 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 YWHAHQ04917 246 aaPredicted RBP15.92■□□□□ 0.14
CCNE1-202ENST00000357943 CUL2Q13617 745 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 VARS2Q5ST30 1063 aaKnown RBP15.92■□□□□ 0.14
CCNE1-202ENST00000357943 KLHDC7AQ5VTJ3 777 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 DPH6Q7L8W6 267 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 ADGRF2Q8IZF7 708 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 AUTS2Q8WXX7 1259 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 ZBP1Q9H171 429 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 PLCB1Q9NQ66 1216 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 PLXNA4Q9HCM2 1894 aa15.92■□□□□ 0.14
CCNE1-202ENST00000357943 HCRTO43612 131 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 TPM3P06753 285 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 UCHL3P15374 230 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 DSG1Q02413 1049 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 GCNT1Q02742 428 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 UBE3AQ05086 875 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 KIAA1841Q6NSI8 718 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 PRSS55Q6UWB4 352 aaPredicted RBP15.91■□□□□ 0.14
CCNE1-202ENST00000357943 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 OSTM1Q86WC4 334 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 RIN2Q8WYP3 895 aaPredicted RBP15.91■□□□□ 0.14
CCNE1-202ENST00000357943 FAXDC2Q96IV6 333 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 KREMEN1Q96MU8 473 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 TCF25Q9BQ70 676 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 TLR9Q9NR96 1032 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 STK39Q9UEW8 545 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 DSEQ9UL01 958 aa15.91■□□□□ 0.14
CCNE1-202ENST00000357943 NME7Q9Y5B8 376 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms