RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 UBTFL6P0CB48 400 aaPredicted RBP10.71□□□□□ -0.69
PTPRA-203ENST00000356147 UNGP13051 313 aaPredicted RBP10.71□□□□□ -0.69
PTPRA-203ENST00000356147 KLRC2P26717 231 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 MARK3P27448 753 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 SERPINB3P29508 390 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 KLC1Q07866 573 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 TCEAL1Q15170 157 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 SNX30Q5VWJ9 437 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 SLC30A9Q6PML9 568 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 CDAN1Q8IWY9 1227 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 TCP10LQ8TDR4 215 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 CSRNP1Q96S65 589 aa10.71□□□□□ -0.69
PTPRA-203ENST00000356147 ATRNL1Q5VV63 1379 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 CLRN2A0PK11 232 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 TCP10L2B9ZVM9 353 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 SGK1O00141 431 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 SP100P23497 879 aaPredicted RBP10.71□□□□□ -0.7
PTPRA-203ENST00000356147 YWHABP31946 246 aaKnown RBP10.71□□□□□ -0.7
PTPRA-203ENST00000356147 CCDC15Q0P6D6 951 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 NR1H3Q13133 447 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 DGKZQ13574 1117 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 CCNG2Q16589 344 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 TSNAXIP1Q2TAA8 658 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 MSS51Q4VC12 460 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 SEZ6Q53EL9 994 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 ZNF394Q53GI3 561 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 C4orf50Q6ZRC1 276 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 CCNJLQ8IV13 435 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 ZCCHC9Q8N567 271 aaKnown RBP10.71□□□□□ -0.7
PTPRA-203ENST00000356147 FBXO27Q8NI29 283 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 RNF217Q8TC41 542 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 SCG3Q8WXD2 468 aaKnown RBP10.71□□□□□ -0.7
PTPRA-203ENST00000356147 BSNDQ8WZ55 320 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 GMCL1Q96IK5 515 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.7
PTPRA-203ENST00000356147 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
PTPRA-203ENST00000356147 PIK3CDO00329 1044 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 NFIBO00712 420 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ATP9AO75110 1047 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TBX10O75333 385 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TCEA3O75764 348 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 WFS1O76024 890 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 PROSCO94903 275 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 KRT1P04264 644 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ZCCHC18P0CG32 403 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 MYCLP12524 364 aaPredicted RBP10.7□□□□□ -0.7
PTPRA-203ENST00000356147 CETN2P41208 172 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ACOT2P49753 483 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 CCNG1P51959 295 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 MTMR2Q13614 643 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 PPP1R15BQ5SWA1 713 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ANKRD22Q5VYY1 191 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TMEM270Q6UE05 265 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TTC17Q96AE7 1141 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 BICD1Q96G01 975 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 SH3GL3Q99963 347 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 F8VP50 259 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 GYG2O15488 501 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TNNI1P19237 187 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 EIF2AK2P19525 551 aaKnown RBP10.7□□□□□ -0.7
PTPRA-203ENST00000356147 PTPN4P29074 926 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 CAV1Q03135 178 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 NFX1Q12986 1120 aaKnown RBP10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ALCAMQ13740 583 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ARMC3Q5W041 872 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TATDN1Q6P1N9 297 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 SLC39A4Q6P5W5 647 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 RINLQ6ZS11 566 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 NLRX1Q86UT6 975 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 RHOT1Q8IXI2 618 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■■■■■ 69.6
PTPRA-203ENST00000356147 ZNF516Q92618 1163 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 CLPTM1LQ96KA5 538 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 ZNF395Q9H8N7 513 aaPredicted RBP10.7□□□□□ -0.7
PTPRA-203ENST00000356147 TMEM8AQ9HCN3 771 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 IVNS1ABPQ9Y6Y0 642 aa10.7□□□□□ -0.7
PTPRA-203ENST00000356147 SMAPO00193 183 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 DNALI1O14645 258 aaPredicted RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 HNRNPDLO14979 420 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 P4HA2O15460 535 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 TYROBPO43914 113 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 HARSP12081 509 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 RASSF2P50749 326 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 PAPOLAP51003 745 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GPX6P59796 221 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 HHIPL2Q6UWX4 724 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 LDHDQ86WU2 507 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 INPP5DQ92835 1189 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 MCUR1Q96AQ8 359 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 CYTH2Q99418 400 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 TBX20Q9UMR3 447 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 TCRBV7S3A2A0A539 114 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 LIASO43766 372 aa10.69□□□□□ -0.7
PTPRA-203ENST00000356147 P4HBP07237 508 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 VIL1P09327 827 aaKnown RBP10.69□□□□□ -0.7
PTPRA-203ENST00000356147 AMPD1P23109 780 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms