RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 PTPRJQ12913 1337 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 NR3C2P08235 984 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 TMED2Q15363 201 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 MTFR1Q15390 333 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 P3H1Q32P28 736 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 TMEM63BQ5T3F8 832 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 RNF43Q68DV7 783 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 SWSAP1Q6NVH7 229 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 TMEM270Q6UE05 265 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 GSTA5Q7RTV2 222 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 RTKN2Q8IZC4 609 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 CFAP57Q96MR6 1250 aa16.52■□□□□ 0.23
LINC01565-201ENST00000356020 RASA4BC9J798 803 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 RASA4O43374 803 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 ECM2O94769 699 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 HSPA1LP34931 641 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 SSR1P43307 286 aaKnown RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 CCDC60Q8IWA6 550 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 MAML1Q92585 1016 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 ZNF570Q96NI8 536 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 RPAP3Q9H6T3 665 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 AGO2Q9UKV8 859 aaKnown RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 FAM47DPA6NHR8 397 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 WNT10BO00744 389 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 DNALI1O14645 258 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 TAC1P20366 129 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 ATP11AP98196 1134 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 NFX1Q12986 1120 aaKnown RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 NR1H3Q13133 447 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 C11orf91Q3C1V1 193 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 CYP4F22Q6NT55 531 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 MIS18BP1Q6P0N0 1132 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 FITM2Q8N6M3 262 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 RBBP8NLQ8NC74 664 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 FEZF2Q8TBJ5 459 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 RBM41Q96IZ5 413 aaKnown RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 RMDN2Q96LZ7 410 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 SLC24A3Q9HC58 644 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 GINM1Q9NU53 330 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 SLC5A4Q9NY91 659 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 KLHL14Q9P2G3 628 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 IP6K2Q9UHH9 426 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 CORO1CQ9ULV4 474 aaPredicted RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 CNTN6Q9UQ52 1028 aa16.51■□□□□ 0.23
LINC01565-201ENST00000356020 MYH9P35579 1960 aaKnown RBP16.51■□□□□ 0.23
LINC01565-201ENST00000356020 LIASO43766 372 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 DIAPH2O60879 1101 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 SMNDC1O75940 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 TBXAS1P24557 533 aaPredicted RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 GCKP35557 465 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 ACOT2P49753 483 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 IL9RQ01113 521 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 DRICH1Q6PGQ1 229 aaPredicted RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 PRUNE1Q86TP1 453 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 KCNN1Q92952 543 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 SPDL1Q96EA4 605 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 TTC25Q96NG3 672 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 PARVAQ9NVD7 372 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 COL11A1P12107 1806 aaPredicted RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 EXOC1LA0A1B0GW35 172 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 VWA5AO00534 786 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 MSH2P43246 934 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 MTMR2Q13614 643 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 CAPRIN2Q6IMN6 1127 aaKnown RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 ASRGL1Q7L266 308 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 RCOR2Q8IZ40 523 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 SAYSD1Q9NPB0 183 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
LINC01565-201ENST00000356020 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
LINC01565-201ENST00000356020 PIGRP01833 764 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 FOXN2P32314 431 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 NOP14P78316 857 aaKnown RBP16.49■□□□□ 0.23
LINC01565-201ENST00000356020 CCDC15Q0P6D6 951 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 EMC2Q15006 297 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 EAPPQ56P03 285 aaPredicted RBP16.49■□□□□ 0.23
LINC01565-201ENST00000356020 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 TDRPQ86YL5 185 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 SLITRK1Q96PX8 696 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 RAB3IPQ96QF0 476 aaPredicted RBP16.49■□□□□ 0.23
LINC01565-201ENST00000356020 CGRRF1Q99675 332 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 KLHL11Q9NVR0 708 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 TELO2Q9Y4R8 837 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 RIPK3Q9Y572 518 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 ATP2A2P16615 1042 aaKnown RBP16.49■□□□□ 0.23
LINC01565-201ENST00000356020 SSTR3P32745 418 aaPredicted RBP16.49■□□□□ 0.23
LINC01565-201ENST00000356020 WDR4P57081 412 aaKnown RBP16.49■□□□□ 0.23
LINC01565-201ENST00000356020 MCL1Q07820 350 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 ADCY1Q08828 1119 aa16.49■□□□□ 0.23
LINC01565-201ENST00000356020 MGAT5Q09328 741 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms