RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 ACSL3O95573 720 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 APOA4P06727 396 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 HMBSP08397 361 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 PDGFRAP16234 1089 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 ABCE1P61221 599 aaKnown RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 MED21Q13503 144 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 BTG3Q14201 252 aaPredicted RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 PCBP1Q15365 356 aaKnown RBP eCLIP11.82□□□□□ -0.521e-61■□□□□ 8.9
FN1-204ENST00000356005 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 C2orf81A6NN90 581 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 H3BRB1 525 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 TMPRSS15P98073 1019 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 CXCL9Q07325 125 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 LLGL1Q15334 1064 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 ADCK2Q7Z695 626 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 ZBTB9Q96C00 473 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 NCKAP1Q9Y2A7 1128 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 F9P00740 461 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 HIF1AQ16665 826 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 KIF17Q9P2E2 1029 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 PRG3Q9Y2Y8 225 aaPredicted RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 ATP8B1O43520 1251 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 LZTS3O60299 673 aaPredicted RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 RTN3O95197 1032 aaPredicted RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 AARSP49588 968 aaKnown RBP eCLIP11.82□□□□□ -0.52
FN1-204ENST00000356005 C2orf54Q08AI8 447 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 DHX34Q14147 1143 aaKnown RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 NBPF9Q3BBW0 867 aa11.82□□□□□ -0.52
FN1-204ENST00000356005 EPM2AIP1Q7L775 607 aaPredicted RBP11.82□□□□□ -0.52
FN1-204ENST00000356005 ERVK-9P63128 1117 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ERVK-24P63145 666 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 MAPRE2Q15555 327 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 GOLGA7BQ2TAP0 167 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ARHGEF26Q96DR7 871 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.81□□□□□ -0.52
FN1-204ENST00000356005 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 NALCNQ8IZF0 1738 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 OGTO15294 1046 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 GNRH1P01148 92 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 GBP5Q96PP8 586 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ZFATQ9P243 1243 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 LRRC53A6NM62 1247 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 CAND2O75155 1236 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SUPT3HO75486 399 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 MBL2P11226 248 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 ADORA2AP29274 412 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 EFTUD2Q15029 972 aaKnown RBP eCLIP11.81□□□□□ -0.522e-8■□□□□ 11.3
FN1-204ENST00000356005 NBPF12Q5TAG4 269 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 PLA2G4FQ68DD2 849 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ZNF410Q86VK4 478 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 AP1M1Q9BXS5 423 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ANKRD12Q6UB98 2062 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ARIH2O95376 493 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 PTK6Q13882 451 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 FBXO16Q8IX29 292 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 XPO6Q96QU8 1125 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 EIF2AQ9BY44 585 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 TRIM9Q9C026 710 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 VPS11Q9H270 941 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 LATS2Q9NRM7 1088 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 CHCHD3Q9NX63 227 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 FBXO21O94952 628 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SERPIND1P05546 499 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SLC8A1P32418 973 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 LRRC71Q8N4P6 559 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SPATA17Q96L03 361 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SENP6Q9GZR1 1112 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 ZMYND10O75800 440 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 C11orf57Q6ZUT1 292 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 DSG4Q86SJ6 1040 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 CEMIPQ8WUJ3 1361 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 SMAPO00193 183 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 NMT1P30419 496 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 BCAT1P54687 386 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 HIST2H2ACQ16777 129 aaPredicted RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 FASTKD1Q53R41 847 aaKnown RBP11.81□□□□□ -0.52
FN1-204ENST00000356005 HIST2H2AA3Q6FI13 130 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 RNF135Q8IUD6 432 aa11.81□□□□□ -0.52
FN1-204ENST00000356005 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.81□□□□□ -0.522e-44■■■■□ 22.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms