RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RSPH3Q86UC2 560 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 PCSK9Q8NBP7 692 aaKnown RBP18.34■□□□□ 0.53
VPS13B-201ENST00000355155 TSEN34Q9BSV6 310 aaKnown RBP18.34■□□□□ 0.53
VPS13B-201ENST00000355155 ZNF446Q9NWS9 450 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 PCDHA3Q9Y5H8 950 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 SCINQ9Y6U3 715 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 TRIP11Q15643 1979 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 FGFR4P22455 802 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 YARSP54577 528 aaKnown RBP18.34■□□□□ 0.53
VPS13B-201ENST00000355155 LIN9Q5TKA1 542 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 DCAF12L1Q5VU92 463 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 GDF6Q6KF10 455 aaPredicted RBP18.34■□□□□ 0.53
VPS13B-201ENST00000355155 HPDLQ96IR7 371 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 XPNPEP3Q9NQH7 507 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 SNTG2Q9NY99 539 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 UBQLN1Q9UMX0 589 aaKnown RBP18.34■□□□□ 0.53
VPS13B-201ENST00000355155 POLIQ9UNA4 740 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 CCDC66A2RUB6 948 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 PGRMC1O00264 195 aaKnown RBP18.33■□□□□ 0.53
VPS13B-201ENST00000355155 PIRO00625 290 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 THAP12O43422 761 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 CALB1P05937 261 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 RBM10P98175 930 aaKnown RBP18.33■□□□□ 0.53
VPS13B-201ENST00000355155 TAP1Q03518 808 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 TRIM32Q13049 653 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 PPP1R15BQ5SWA1 713 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 BEST2Q8NFU1 509 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 ZMAT2Q96NC0 199 aaKnown RBP18.33■□□□□ 0.53
VPS13B-201ENST00000355155 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.53
VPS13B-201ENST00000355155 SAGE1Q9NXZ1 904 aa18.33■□□□□ 0.53
VPS13B-201ENST00000355155 PACSIN2Q9UNF0 486 aaPredicted RBP18.33■□□□□ 0.53
VPS13B-201ENST00000355155 KCNK3O14649 394 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 CD4P01730 458 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 POLR2BP30876 1174 aaKnown RBP18.33■□□□□ 0.52
VPS13B-201ENST00000355155 PPP2R5EQ16537 467 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 NAA35Q5VZE5 725 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 TMEM35BQ8NCS4 154 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 SMG8Q8ND04 991 aaKnown RBP18.33■□□□□ 0.52
VPS13B-201ENST00000355155 KIF12Q96FN5 646 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 GDAP2Q9NXN4 497 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 BARX2Q9UMQ3 279 aaPredicted RBP18.33■□□□□ 0.52
VPS13B-201ENST00000355155 GRIN2DO15399 1336 aa18.33■□□□□ 0.52
VPS13B-201ENST00000355155 CFHP08603 1231 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 HSPA6P17066 643 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 CCND3P30281 292 aaPredicted RBP18.32■□□□□ 0.52
VPS13B-201ENST00000355155 LRPAP1P30533 357 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 CXCR5P32302 372 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 TRIM71Q2Q1W2 868 aaKnown RBP18.32■□□□□ 0.52
VPS13B-201ENST00000355155 WDTC1Q8N5D0 677 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 SLC43A3Q8NBI5 491 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
VPS13B-201ENST00000355155 XPOTO43592 962 aaKnown RBP18.32■□□□□ 0.52
VPS13B-201ENST00000355155 GABRB2P47870 512 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 STILQ15468 1287 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 MRPL10Q7Z7H8 261 aaKnown RBP18.32■□□□□ 0.52
VPS13B-201ENST00000355155 TFAP2BQ92481 460 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 MS4A14Q96JA4 679 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 NAP1L3Q99457 506 aaPredicted RBP18.32■□□□□ 0.52
VPS13B-201ENST00000355155 AGAP1Q9UPQ3 857 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 CDY2AQ9Y6F7 541 aa18.32■□□□□ 0.52
VPS13B-201ENST00000355155 RECQL4O94761 1208 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 VDRP11473 427 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 PRKAR2AP13861 404 aaKnown RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 TMEM62Q0P6H9 643 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 PTK7Q13308 1070 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 BEND6Q5SZJ8 279 aaPredicted RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 UBL4BQ8N7F7 174 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 TMEM176AQ96HP8 235 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 EPC1Q9H2F5 836 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 GOLPH3Q9H4A6 298 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 RBM12Q9NTZ6 932 aaKnown RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 NOC2LQ9Y3T9 749 aaKnown RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 RRP9O43818 475 aaKnown RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 COMTP21964 271 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 RRM1P23921 792 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 MYO1EQ12965 1108 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 MAMLD1Q13495 774 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 CNGA2Q16280 664 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 WDR72Q3MJ13 1102 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 CCDC70Q6NSX1 233 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 CXCL17Q6UXB2 119 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 UNC93AQ86WB7 457 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 NIPA2Q8N8Q9 360 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
VPS13B-201ENST00000355155 CALCAP01258 141 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 ASGR1P07306 291 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 WEE2P0C1S8 567 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 PNPLA4P41247 253 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 KCNA10Q16322 511 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 C9orf57Q5W0N0 161 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 CPA5Q8WXQ8 436 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 ELOVL4Q9GZR5 314 aa18.31■□□□□ 0.52
VPS13B-201ENST00000355155 ERVK-5Q9HDB9 667 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms