RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ZSCAN18Q8TBC5 510 aaPredicted RBP17.23■□□□□ 0.35
PDGFA-201ENST00000354513 ZNF512Q96ME7 567 aaPredicted RBP17.23■□□□□ 0.35
PDGFA-201ENST00000354513 TRMT61BQ9BVS5 477 aaKnown RBP17.23■□□□□ 0.35
PDGFA-201ENST00000354513 BRD9Q9H8M2 597 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
PDGFA-201ENST00000354513 PARVGQ9HBI0 331 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 TRPV5Q9NQA5 729 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 ASAH2Q9NR71 780 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 PTPRDP23468 1912 aa17.23■□□□□ 0.35
PDGFA-201ENST00000354513 A0A1W2PRU2 124 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 ANO9A1A5B4 782 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 PIRO00625 290 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 TRAK2O60296 914 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 SOAT2O75908 522 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 FAM13AO94988 1023 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 PSMC3P17980 439 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 MARCKSP29966 332 aaPredicted RBP17.22■□□□□ 0.35
PDGFA-201ENST00000354513 MTAPQ13126 283 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 ZC2HC1CQ53FD0 456 aaPredicted RBP17.22■□□□□ 0.35
PDGFA-201ENST00000354513 CYP4A22Q5TCH4 519 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 C9orf57Q5W0N0 161 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 IQCEQ6IPM2 695 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 ZNF852Q6ZMS4 543 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 ERMP1Q7Z2K6 904 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 ELMOD1Q8N336 334 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 LEMD2Q8NC56 503 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 RUBCNQ92622 972 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 SENP8Q96LD8 212 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 LRRC3BQ96PB8 259 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 MSTO1Q9BUK6 570 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 CHRDQ9H2X0 955 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 RPF1Q9H9Y2 349 aaKnown RBP17.22■□□□□ 0.35
PDGFA-201ENST00000354513 NDRG2Q9UN36 371 aaKnown RBP17.22■□□□□ 0.35
PDGFA-201ENST00000354513 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 SLC27A5Q9Y2P5 690 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 F5P12259 2224 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 GPR179Q6PRD1 2367 aa17.22■□□□□ 0.35
PDGFA-201ENST00000354513 OR6C75A6NL08 312 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 HEPACAM2A8MVW5 462 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
PDGFA-201ENST00000354513 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
PDGFA-201ENST00000354513 UBA7P41226 1012 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 WNT7BP56706 349 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 FOXK2Q01167 660 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 MYBPC2Q14324 1141 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
PDGFA-201ENST00000354513 KYAT1Q16773 422 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 OVOS1Q6IE37 1185 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 CRELD2Q6UXH1 353 aaPredicted RBP17.21■□□□□ 0.35
PDGFA-201ENST00000354513 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 GAREM2Q75VX8 874 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 MFSD6LQ8IWD5 586 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 ATAD1Q8NBU5 361 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 DEPDC1BQ8WUY9 529 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 NELL2Q99435 816 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
PDGFA-201ENST00000354513 PCDHGA2Q9Y5H1 932 aa17.21■□□□□ 0.35
PDGFA-201ENST00000354513 PPP1R37O75864 691 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 CYP11A1P05108 521 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 ACOT2P49753 483 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 GAS6Q14393 721 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 PTPAQ15257 358 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.34
PDGFA-201ENST00000354513 EFCAB13Q8IY85 973 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.34
PDGFA-201ENST00000354513 IRF7Q92985 503 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 TSPAN18Q96SJ8 248 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 EPC1Q9H2F5 836 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 ZSCAN32Q9NX65 697 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.21■□□□□ 0.34
PDGFA-201ENST00000354513 STYXL1Q9Y6J8 313 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 PIAS3Q9Y6X2 628 aa17.21■□□□□ 0.34
PDGFA-201ENST00000354513 CEP250Q9BV73 2442 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
PDGFA-201ENST00000354513 CHRNB1P11230 501 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 ATF6P18850 670 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 SCP2P22307 547 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 CDR1P51861 262 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 USP37Q86T82 979 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 GPIHBP1Q8IV16 184 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 ZSWIM2Q8NEG5 633 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 PSMG2Q969U7 264 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 STRA6Q9BX79 667 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 IL21Q9HBE4 155 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 MRPS17Q9Y2R5 130 aaKnown RBP17.2■□□□□ 0.34
PDGFA-201ENST00000354513 DERAQ9Y315 318 aa17.2■□□□□ 0.34
PDGFA-201ENST00000354513 RALGAPA1Q6GYQ0 2036 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 MED19A0JLT2 244 aaPredicted RBP17.19■□□□□ 0.34
PDGFA-201ENST00000354513 NCAM2O15394 837 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 ODC1P11926 461 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 ADSSP30520 456 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 SOX9P48436 509 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms