RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 IRAK1P51617 712 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 ZNF252P-AS1Q0IIN9 211 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 WDR72Q3MJ13 1102 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 LIN9Q5TKA1 542 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 PTPN18Q99952 460 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 RALAP11233 206 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 SMPD1P17405 629 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 ARF4P18085 180 aaPredicted RBP16.53■□□□□ 0.24
MBD1-205ENST00000353909 TMOD1P28289 359 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 CCNA1P78396 465 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 IRX5P78411 483 aaPredicted RBP16.53■□□□□ 0.24
MBD1-205ENST00000353909 OGDHQ02218 1023 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 ADCY2Q08462 1091 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 CLUL1Q15846 466 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 GPR162Q16538 588 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 SGO2Q562F6 1265 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 JADE1Q6IE81 842 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 LEKR1Q6ZMV7 388 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 LINC01465Q8N7H1 131 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 PPTC7Q8NI37 304 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 ATP6V1G3Q96LB4 118 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 CXCL16Q9H2A7 254 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 RPF1Q9H9Y2 349 aaKnown RBP16.53■□□□□ 0.24
MBD1-205ENST00000353909 HMGXB4Q9UGU5 601 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 KAT6AQ92794 2004 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 DCDC2CA8MYV0 355 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 H3BRB1 525 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 SHOX2O60902 331 aaPredicted RBP16.52■□□□□ 0.24
MBD1-205ENST00000353909 PPFIA2O75334 1257 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 CETPP11597 493 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
MBD1-205ENST00000353909 PDCLQ13371 301 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 TRIP13Q15645 432 aaPredicted RBP16.52■□□□□ 0.24
MBD1-205ENST00000353909 GPR142Q7Z601 462 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 DPP9Q86TI2 863 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 CCDC50Q8IVM0 306 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 ACSF2Q96CM8 615 aaPredicted RBP16.52■□□□□ 0.24
MBD1-205ENST00000353909 PDZD7Q9H5P4 517 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
MBD1-205ENST00000353909 TMBIM4Q9HC24 238 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
MBD1-205ENST00000353909 PI4K2BG5E9Z4 385 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 TP73O15350 636 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 TNNC2P02585 160 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 SHBGP04278 402 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 ITGB3P05106 788 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 ZNF484Q5JVG2 852 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 MARCH8Q5T0T0 291 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 TXNRD3NBQ6F5E7 133 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 ANKRD36BP1Q96IX9 119 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 VCPIP1Q96JH7 1222 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 MCEEQ96PE7 176 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 TWNKQ96RR1 684 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 CAPS2Q9BXY5 557 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 LRRC19Q9H756 370 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 MRPL47Q9HD33 250 aaKnown RBP16.52■□□□□ 0.23
MBD1-205ENST00000353909 VTA1Q9NP79 307 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 CYTH4Q9UIA0 394 aa16.52■□□□□ 0.23
MBD1-205ENST00000353909 TRIP11Q15643 1979 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 IQCA1LA6NCM1 817 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 F8VP50 259 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 SLC1A1P43005 524 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 PHKA2P46019 1235 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 DRG2P55039 364 aaKnown RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 TMEM62Q0P6H9 643 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 FEZF2Q8TBJ5 459 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 RNF25Q96BH1 459 aaPredicted RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 SMYD3Q9H7B4 428 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 RASAL2Q9UJF2 1139 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 GINS2Q9Y248 185 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 ASAP2O43150 1006 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 HPDP32754 393 aaPredicted RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 GNGT1P63211 74 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 SURF1Q15526 300 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 SLC10A6Q3KNW5 377 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 DENND1BQ6P3S1 775 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 UHMK1Q8TAS1 419 aaKnown RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 CXorf38Q8TB03 319 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 SEMA4AQ9H3S1 761 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 PARVAQ9NVD7 372 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 PRMT7Q9NVM4 692 aaPredicted RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
MBD1-205ENST00000353909 TCRBV5S1A1TA0A578 114 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 CD19P15391 556 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 GUCY1A3Q02108 690 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 PRAMEF19Q5SWL8 479 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 PRUNE1Q86TP1 453 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 C12orf50Q8NA57 414 aaPredicted RBP16.51■□□□□ 0.23
MBD1-205ENST00000353909 NPLOC4Q8TAT6 608 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 NLRP7Q8WX94 980 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 MAML3Q96JK9 1138 aa16.51■□□□□ 0.23
MBD1-205ENST00000353909 LOC102724159A0A0B4J2E5 919 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 TMEM191CA6NGB0 347 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 PODXLO00592 558 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms