RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RBM12Q9NTZ6 932 aaKnown RBP14.44□□□□□ -0.1
SMC6-201ENST00000351948 ATRNO75882 1429 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 FRMPD4Q14CM0 1322 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 BTBD19C9JJ37 291 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 NKRFO15226 690 aaKnown RBP eCLIP14.43□□□□□ -0.15e-6■□□□□ 8.5
SMC6-201ENST00000351948 S100BP04271 92 aaPredicted RBP14.43□□□□□ -0.1
SMC6-201ENST00000351948 GABPB1Q06547 395 aaPredicted RBP14.43□□□□□ -0.1
SMC6-201ENST00000351948 PTGISQ16647 500 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 NIPA1Q7RTP0 329 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 DCP1BQ8IZD4 617 aaKnown RBP14.43□□□□□ -0.1
SMC6-201ENST00000351948 ZC3H15Q8WU90 426 aaKnown RBP14.43□□□□□ -0.1
SMC6-201ENST00000351948 YME1L1Q96TA2 773 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 DONSONQ9NYP3 566 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 FGRP09769 529 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 NR1D1P20393 614 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 VSNL1P62760 191 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 COG1Q8WTW3 980 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 PORCNQ9H237 461 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 SP3Q02447 781 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 ASPHQ12797 758 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 ADGRF2Q8IZF7 708 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 LACRTQ9GZZ8 138 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 UBIAD1Q9Y5Z9 338 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 RASA4BC9J798 803 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 RASA4O43374 803 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 CST8O60676 142 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 CALCAP01258 141 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 TMEM253P0C7T8 217 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 KRT10P13645 584 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 ELNP15502 786 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 NNMTP40261 264 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 SLC1A1P43005 524 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 ITGB3BPQ13352 177 aaPredicted RBP14.43□□□□□ -0.1
SMC6-201ENST00000351948 CCDC38Q502W7 563 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 SENP6Q9GZR1 1112 aaPredicted RBP14.43□□□□□ -0.1
SMC6-201ENST00000351948 IKZF4Q9H2S9 585 aa14.43□□□□□ -0.1
SMC6-201ENST00000351948 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 ODC1P11926 461 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 ECM1Q16610 540 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 GLE1Q53GS7 698 aaKnown RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 C1orf186Q6ZWK4 172 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 DDX42Q86XP3 938 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMC6-201ENST00000351948 ZNF507Q8TCN5 953 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 TTC1Q99614 292 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 OSBPL8Q9BZF1 889 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 OSGEPQ9NPF4 335 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 DDIT4Q9NX09 232 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 GGCXP38435 758 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 PNPLA4P41247 253 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 PMS2P54278 862 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 NSUN2Q08J23 767 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMC6-201ENST00000351948 BFSP2Q13515 415 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 FEZF2Q8TBJ5 459 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 UPF1Q92900 1129 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMC6-201ENST00000351948 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMC6-201ENST00000351948 GPATCH2LQ9NWQ4 482 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 MYPNQ86TC9 1320 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 GPD1P21695 349 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 RRM1P23921 792 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 IQSEC1Q6DN90 963 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 ZNF571Q7Z3V5 609 aaPredicted RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 CDKL3Q8IVW4 592 aaPredicted RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 RAB6BQ9NRW1 208 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 F8VZ95 297 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 EEF2KO00418 725 aaKnown RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 CDR2Q01850 454 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 ARHGEF19Q8IW93 802 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 KIAA0319LQ8IZA0 1049 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 ASIC4Q96FT7 647 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 PGLYRP2Q96PD5 576 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 FBXL5Q9UKA1 691 aa14.42□□□□□ -0.1
SMC6-201ENST00000351948 PARP4Q9UKK3 1724 aaKnown RBP14.42□□□□□ -0.1
SMC6-201ENST00000351948 CCDC160A6NGH7 325 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 PIK3CDO00329 1044 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
SMC6-201ENST00000351948 RAG1P15918 1043 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 MAP3K7CLP57077 242 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 IFT88Q13099 833 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 PIGHQ14442 188 aaPredicted RBP14.41□□□□□ -0.1
SMC6-201ENST00000351948 HSDL1Q3SXM5 330 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 IL31Q6EBC2 164 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 FAM47EQ6ZV65 393 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 CDC26Q8NHZ8 85 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 MORC4Q8TE76 937 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 BFARQ9NZS9 450 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 BAIAP2L1Q9UHR4 511 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 CAPN6Q9Y6Q1 641 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 M0QYT0 321 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ETFBP38117 255 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 FLT3LGP49771 235 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 DLG4P78352 724 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 PCSK7Q16549 785 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 P3H1Q32P28 736 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 RNF135Q8IUD6 432 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 SPATA18Q8TC71 538 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 SLC35C1Q96A29 364 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms