RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CLCN2P51788 898 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 DYNLL1P63167 89 aaKnown RBP13.96□□□□□ -0.18
IFT88-202ENST00000351808 DRAP1Q14919 205 aaPredicted RBP13.96□□□□□ -0.18
IFT88-202ENST00000351808 GRAMD1BQ3KR37 738 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 IYDQ6PHW0 289 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 PACS1Q6VY07 963 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 ADGRG6Q86SQ4 1221 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 ZNF276Q8N554 614 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 PPP4R1Q8TF05 950 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 USP6NLQ92738 828 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 BTBD6Q96KE9 485 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 HESX1Q9UBX0 185 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 APPL1Q9UKG1 709 aa13.96□□□□□ -0.18
IFT88-202ENST00000351808 MYH11P35749 1972 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 USP17L21D6R901 530 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 MATN2O00339 956 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 XPOTO43592 962 aaKnown RBP13.95□□□□□ -0.18
IFT88-202ENST00000351808 OXSR1O95747 527 aaPredicted RBP13.95□□□□□ -0.18
IFT88-202ENST00000351808 PLS3P13797 630 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 PUM3Q15397 648 aaKnown RBP13.95□□□□□ -0.18
IFT88-202ENST00000351808 TGFBIQ15582 683 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 KRT79Q5XKE5 535 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 FRMD5Q7Z6J6 570 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 RHOT2Q8IXI1 618 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 C12orf50Q8NA57 414 aaPredicted RBP13.95□□□□□ -0.18
IFT88-202ENST00000351808 TEKT1Q969V4 418 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 ACP6Q9NPH0 428 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 AK5Q9Y6K8 562 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 KLRF2D3W0D1 207 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 CYTH3O43739 400 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 DLDP09622 509 aaKnown RBP13.95□□□□□ -0.18
IFT88-202ENST00000351808 CABP4P57796 275 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 BCL2A1Q16548 175 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 CALCRLQ16602 461 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 C6orf183Q5T699 404 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 C11orf63Q6NUN7 778 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 ICA1LQ8NDH6 482 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 HIPK4Q8NE63 616 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 JDP2Q8WYK2 163 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 CASP10Q92851 521 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 TUBA8Q9NY65 449 aaPredicted RBP13.95□□□□□ -0.18
IFT88-202ENST00000351808 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
IFT88-202ENST00000351808 FAM237BA0A1B0GVD1 139 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 CAPN8A6NHC0 703 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ADCY6O43306 1168 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 SPOPO43791 374 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 AKAP3O75969 853 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 CDH2P19022 906 aaPredicted RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 CASP4P49662 377 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 BCAMP50895 628 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 NCKAP1LP55160 1127 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 CLPPQ16740 277 aaPredicted RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 SMUG1Q53HV7 270 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 TMEM214Q6NUQ4 689 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 KRT25Q7Z3Z0 450 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 PASD1Q8IV76 773 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 PRPF18Q99633 342 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 SYT11Q9BT88 431 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 EIF2AQ9BY44 585 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ARMC7Q9H6L4 198 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 PLGRKTQ9HBL7 147 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 TRPV5Q9NQA5 729 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 FRMPD4Q14CM0 1322 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 GOLGA8RI6L899 631 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 SORBS3O60504 671 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 FTLP02792 175 aaPredicted RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 CASP5P51878 434 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 NAPAP54920 295 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 PTK6Q13882 451 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 KRT81Q14533 505 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ZYXQ15942 572 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 AAGABQ6PD74 315 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 POU5F2Q8N7G0 328 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 ZFRQ96KR1 1074 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 UTP6Q9NYH9 597 aaKnown RBP13.94□□□□□ -0.18
IFT88-202ENST00000351808 DNAJC12Q9UKB3 198 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 DUOX1Q9NRD9 1551 aa13.94□□□□□ -0.18
IFT88-202ENST00000351808 FUOMA2VDF0 154 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 GCP02774 474 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 CPA3P15088 417 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
IFT88-202ENST00000351808 CAV1Q03135 178 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 GK3PQ14409 553 aa13.93□□□□□ -0.18
IFT88-202ENST00000351808 EDRF1Q3B7T1 1238 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms