RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CDH5P33151 784 aaPredicted RBP17.75■□□□□ 0.43
SAMM50-201ENST00000350028 HSD17B3P37058 310 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 ASPAP45381 313 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 ACVR2BQ13705 512 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 C2CD6Q53TS8 623 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 ZNF667Q5HYK9 610 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 RHOT1Q8IXI2 618 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 OR6J1Q8NGC5 347 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 ARL8AQ96BM9 186 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 DDX27Q96GQ7 796 aaKnown RBP17.75■□□□□ 0.43
SAMM50-201ENST00000350028 PKNOX2Q96KN3 472 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 TRIM31Q9BZY9 425 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 IP6K2Q9UHH9 426 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 PLAAQ9Y263 795 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 TCRBV7S2A1N4TA0A589 114 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 TLR3O15455 904 aaKnown RBP17.74■□□□□ 0.43
SAMM50-201ENST00000350028 MMP3P08254 477 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 WEE2P0C1S8 567 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 EIF4BP23588 611 aaKnown RBP17.74■□□□□ 0.43
SAMM50-201ENST00000350028 BRD2P25440 801 aaKnown RBP17.74■□□□□ 0.43
SAMM50-201ENST00000350028 ATICP31939 592 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 SSTR3P32745 418 aaPredicted RBP17.74■□□□□ 0.43
SAMM50-201ENST00000350028 DGKDQ16760 1214 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 TTMPQ5BVD1 217 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 LLGL2Q6P1M3 1020 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 TTC27Q6P3X3 843 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 TMEM192Q8IY95 271 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 FMO2Q99518 471 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 BCO2Q9BYV7 579 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 ZDHHC18Q9NUE0 388 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 CEP83Q9Y592 693 aa17.74■□□□□ 0.43
SAMM50-201ENST00000350028 TRPM7Q96QT4 1865 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 RRN3P2A6NIE6 340 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 MED7O43513 233 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 VTNP04004 478 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 KRT19P08727 400 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 CAPN2P17655 700 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 ARF4P18085 180 aaPredicted RBP17.73■□□□□ 0.43
SAMM50-201ENST00000350028 TAP1Q03518 808 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 GRIK4Q16099 956 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 TMC3Q7Z5M5 1100 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 CCDC105Q8IYK2 499 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 SLCO2A1Q92959 643 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 FAM129AQ9BZQ8 928 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 NXF1Q9UBU9 619 aaKnown RBP17.73■□□□□ 0.43
SAMM50-201ENST00000350028 SIX4Q9UIU6 781 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 SNX24Q9Y343 169 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 MGAMO43451 1857 aa17.73■□□□□ 0.43
SAMM50-201ENST00000350028 TMEM191CA6NGB0 347 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 PPFIA2O75334 1257 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 NFICP08651 508 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 PAEPP09466 180 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 FLT3P36888 993 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-201ENST00000350028 UAP1Q16222 522 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ZNF394Q53GI3 561 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 JADE1Q6IE81 842 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 SCARA5Q6ZMJ2 495 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 KATNAL2Q8IYT4 538 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 C1orf127Q8N9H9 656 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 NLRP7Q8WX94 980 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 PTPN18Q99952 460 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 VRTNQ9H8Y1 702 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ZHX1Q9UKY1 873 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-201ENST00000350028 POLIQ9UNA4 740 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ERICH4A6NGS2 130 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 CELF2O95319 508 aaKnown RBP17.72■□□□□ 0.43
SAMM50-201ENST00000350028 KRT14P02533 472 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ACTN2P35609 894 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 CETN2P41208 172 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 DHX9Q08211 1270 aaKnown RBP17.72■□□□□ 0.43
SAMM50-201ENST00000350028 IRF5Q13568 498 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 SGO2Q562F6 1265 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 MARCH8Q5T0T0 291 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 LEKR1Q6ZMV7 388 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ERICH1Q86X53 443 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 NT5DC4Q86YG4 428 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 NPLOC4Q8TAT6 608 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 TFAP2BQ92481 460 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 CPB2Q96IY4 423 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ADPGKQ9BRR6 497 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 TXLNGYQ9BZA5 131 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 LHX5Q9H2C1 402 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 CYP3A43Q9HB55 503 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 HOMER3Q9NSC5 361 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 PRDM4Q9UKN5 801 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 ZNF236Q9UL36 1845 aa17.72■□□□□ 0.43
SAMM50-201ENST00000350028 TCRBV5S1A1TA0A578 114 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 GOLGA6L10A6NI86 522 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 A6NNZ2 444 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 H0YGN5 161 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 TSPAN1O60635 241 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 CSDE1O75534 798 aaKnown RBP17.71■□□□□ 0.43
SAMM50-201ENST00000350028 RPS6KA5O75582 802 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 ECEL1O95672 775 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 P4HA1P13674 534 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 CDC42EP1Q00587 391 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 SLC10A6Q3KNW5 377 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms