RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KATNAL2Q8IYT4 538 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 C4orf33Q8N1A6 199 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 TTLL6Q8N841 843 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 N4BP2L2Q92802 583 aaPredicted RBP19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ATP6V0A4Q9HBG4 840 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 JPH1Q9HDC5 661 aaPredicted RBP19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 EURLQ9NYK6 297 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 NKIRAS1Q9NYS0 192 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ZC3H11AO75152 810 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■■■□□ 14.7
PTP4A3-202ENST00000349124 TCEA3O75764 348 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 PECAM1P16284 738 aaPredicted RBP19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 CCND2P30279 289 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 MAN1A1P33908 653 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 CLDN10P78369 228 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 PKN2Q16513 984 aaKnown RBP19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 SNRNP48Q6IEG0 339 aaKnown RBP19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.16■□□□□ 0.662e-8■□□□□ 10.8
PTP4A3-202ENST00000349124 GIMAP7Q8NHV1 300 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 C17orf75Q9HAS0 396 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 LGALS13Q9UHV8 139 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 GRID1Q9ULK0 1009 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 LIASO43766 372 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 BPIFB4P59827 614 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 CAV1Q03135 178 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 GPS1Q13098 491 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNF677Q86XU0 584 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 MCPH1Q8NEM0 835 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 FEZF2Q8TBJ5 459 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 MAGEC3Q8TD91 643 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNF606Q8WXB4 792 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 PITPNM3Q9BZ71 974 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 MYOZ2Q9NPC6 264 aa19.16■□□□□ 0.66
PTP4A3-202ENST00000349124 PSTPIP1O43586 416 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 PSAPP07602 524 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 EZRP15311 586 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 ARSEP51690 589 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 NOP14P78316 857 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNF268Q14587 947 aaPredicted RBP19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 ABHD15Q6UXT9 468 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 EXD1Q8NHP7 514 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 SLC9A2Q9UBY0 812 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 EXOC1LA0A1B0GW35 172 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 IFNB1P01574 187 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 GLRA2P23416 452 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 POLGP54098 1239 aaPredicted RBP19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 MYO1EQ12965 1108 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 EMC2Q15006 297 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 TRIM11Q96F44 468 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 MAGEB18Q96M61 343 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 TMEM121Q9BTD3 319 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 KIAA1586Q9HCI6 787 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 ZNRF3Q9ULT6 936 aa19.15■□□□□ 0.66
PTP4A3-202ENST00000349124 A0A1W2PPM1 405 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 TNFSF9P41273 254 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 ARHGEF18Q6ZSZ5 1173 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 ZCCHC9Q8N567 271 aaKnown RBP19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 MCEEQ96PE7 176 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 SLITRK1Q96PX8 696 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 MRPL47Q9HD33 250 aaKnown RBP19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 K7ERI5 159 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 KRT1P04264 644 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 BRD2P25440 801 aaKnown RBP19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 PLCB3Q01970 1234 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 STRN3Q13033 797 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 STAT4Q14765 748 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 WDR72Q3MJ13 1102 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 ANKMY2Q8IV38 441 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 TMEM130Q8N3G9 435 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 GPRASP2Q96D09 838 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 SENP7Q9BQF6 1050 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 CCDC77Q9BR77 488 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 MSTO1Q9BUK6 570 aa19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 MAP3K20Q9NYL2 800 aaKnown RBP19.14■□□□□ 0.65
PTP4A3-202ENST00000349124 CFAP73A6NFT4 308 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 SLC8A1P32418 973 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 ELF1P32519 619 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 NBPF12Q5TAG4 269 aaPredicted RBP19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 CYP4A22Q5TCH4 519 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 PHF13Q86YI8 300 aaPredicted RBP19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 C12orf65Q9H3J6 166 aaKnown RBP19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 VPS37BQ9H9H4 285 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 RXFP1Q9HBX9 757 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 FAM47DPA6NHR8 397 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 ANP32DO95626 131 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 RPA3P35244 121 aaPredicted RBP19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 DYNLT1P63172 113 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 NCOA4Q13772 614 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 MTFR1Q15390 333 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 TRABD2AQ86V40 505 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 KLHL14Q9P2G3 628 aa19.13■□□□□ 0.65
PTP4A3-202ENST00000349124 TMEM191CA6NGB0 347 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 TMEM191BP0C7N4 346 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 FGFR1P11362 822 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 DPEP1P16444 411 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 ZBTB33Q86T24 672 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 ZBED8Q8IZ13 594 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 RTKN2Q8IZC4 609 aa19.12■□□□□ 0.65
PTP4A3-202ENST00000349124 MTMR14Q8NCE2 650 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms