RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KRT35Q92764 455 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 TRIM6Q9C030 488 aaPredicted RBP14.48□□□□□ -0.09
CDC42-202ENST00000344548 ELOVL4Q9GZR5 314 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 PDCL3Q9H2J4 239 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 IPPQ9Y573 584 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 ZMYND10O75800 440 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 HMGCRP04035 888 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 NFX1Q12986 1120 aaKnown RBP14.48□□□□□ -0.09
CDC42-202ENST00000344548 ZNF572Q7Z3I7 529 aaPredicted RBP14.48□□□□□ -0.09
CDC42-202ENST00000344548 ZNF564Q8TBZ8 553 aaPredicted RBP14.48□□□□□ -0.09
CDC42-202ENST00000344548 ZNF296Q8WUU4 475 aaPredicted RBP14.48□□□□□ -0.09
CDC42-202ENST00000344548 CACNG4Q9UBN1 327 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 TJP2Q9UDY2 1190 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
CDC42-202ENST00000344548 CYTH4Q9UIA0 394 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 ST3GAL5Q9UNP4 418 aa14.48□□□□□ -0.09
CDC42-202ENST00000344548 SMIM28A0A1B0GU29 152 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 SEC31AO94979 1220 aaKnown RBP14.47□□□□□ -0.09
CDC42-202ENST00000344548 COMTP21964 271 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 MGAT3Q09327 533 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 KYAT1Q16773 422 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 MMS22LQ6ZRQ5 1243 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 SLC4A11Q8NBS3 891 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 MSANTD4Q8NCY6 345 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 C1orf131Q8NDD1 294 aaKnown RBP14.47□□□□□ -0.09
CDC42-202ENST00000344548 RAET1EQ8TD07 263 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 ZFP42Q96MM3 310 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 SENP6Q9GZR1 1112 aaPredicted RBP14.47□□□□□ -0.09
CDC42-202ENST00000344548 PLEKHA4Q9H4M7 779 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 VRTNQ9H8Y1 702 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 CNTN3Q9P232 1028 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 PARP2Q9UGN5 583 aa14.47□□□□□ -0.09
CDC42-202ENST00000344548 MKI67P46013 3256 aaKnown RBP14.47□□□□□ -0.09
CDC42-202ENST00000344548 HCRTO43612 131 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 CILPO75339 1184 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 MTA2O94776 668 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 AXLP30530 894 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 CKAP4Q07065 602 aaKnown RBP14.46□□□□□ -0.09
CDC42-202ENST00000344548 ZNF211Q13398 564 aaPredicted RBP14.46□□□□□ -0.09
CDC42-202ENST00000344548 PTGISQ16647 500 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 LHX8Q68G74 356 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 TAF4BQ92750 862 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 PLEKHA5Q9HAU0 1116 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 AMFRQ9UKV5 643 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 ITGA11Q9UKX5 1188 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 SPTLC1O15269 473 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 CEP104O60308 925 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 CST5P28325 142 aaPredicted RBP14.46□□□□□ -0.09
CDC42-202ENST00000344548 MAP2K2P36507 400 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 NSFP46459 744 aaKnown RBP14.46□□□□□ -0.09
CDC42-202ENST00000344548 ACLYP53396 1101 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 VSNL1P62760 191 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 RBP5P82980 135 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 PCBP1Q15365 356 aaKnown RBP eCLIP14.46□□□□□ -0.09
CDC42-202ENST00000344548 TWF2Q6IBS0 349 aaKnown RBP14.46□□□□□ -0.09
CDC42-202ENST00000344548 DENND1BQ6P3S1 775 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
CDC42-202ENST00000344548 LPIN3Q9BQK8 851 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 LRRC1Q9BTT6 524 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 NR2E1Q9Y466 385 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 TRPV2Q9Y5S1 764 aa14.46□□□□□ -0.09
CDC42-202ENST00000344548 RPS6KA5O75582 802 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 INHAP05111 366 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 CD19P15391 556 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 ATICP31939 592 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 THPOP40225 353 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 ITGA7Q13683 1181 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 CCDC181Q5TID7 509 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 SESTD1Q86VW0 696 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 SYCE1Q8N0S2 351 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 LPPQ93052 612 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 MRPL45Q9BRJ2 306 aaKnown RBP14.45□□□□□ -0.1
CDC42-202ENST00000344548 ADAM22Q9P0K1 906 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
CDC42-202ENST00000344548 RALGAPA2Q2PPJ7 1873 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 O00370 1275 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 PTGESO14684 152 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 MGEA5O60502 916 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 NDST1P52848 882 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 YARSP54577 528 aaKnown RBP14.45□□□□□ -0.1
CDC42-202ENST00000344548 SLC7A5Q01650 507 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 CFAP221Q4G0U5 840 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 XKR4Q5GH76 650 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 C9orf57Q5W0N0 161 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 PHF13Q86YI8 300 aaPredicted RBP14.45□□□□□ -0.1
CDC42-202ENST00000344548 C12orf29Q8N999 325 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 GSTCDQ8NEC7 633 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 CD101Q93033 1021 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 AP1M1Q9BXS5 423 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 ANAPC7Q9UJX3 599 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 SNX9Q9Y5X1 595 aa14.45□□□□□ -0.1
CDC42-202ENST00000344548 GHRP10912 638 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 ITGA4P13612 1032 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 CYP3A5P20815 502 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 MMP8P22894 467 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 CD52P31358 61 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 RPL7AP62424 266 aaKnown RBP14.44□□□□□ -0.1
CDC42-202ENST00000344548 MAMLD1Q13495 774 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 ZNF618Q5T7W0 954 aa14.44□□□□□ -0.1
CDC42-202ENST00000344548 C11orf63Q6NUN7 778 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms