RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SLITRK3O94933 977 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 MXI1P50539 228 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 LIN52Q52LA3 116 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 PPM1HQ9ULR3 514 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 TYROBPO43914 113 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 SNHG28P0DPA3 235 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 ANPEPP15144 967 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 FIZ1Q96SL8 496 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 OSBPL8Q9BZF1 889 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 SMYD3Q9H7B4 428 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 ZNF395Q9H8N7 513 aaPredicted RBP15.69■□□□□ 0.1
CLCN1-201ENST00000343257 DDX4Q9NQI0 724 aaKnown RBP15.69■□□□□ 0.1
CLCN1-201ENST00000343257 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 CCDC195A0A1B0GUA6 201 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 PIK3CDO00329 1044 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 PGM3O95394 542 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 FDX1P10109 184 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 DSG1Q02413 1049 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 RIPOR1Q6ZS17 1223 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 RAPH1Q70E73 1250 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 KLHL23Q8NBE8 558 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 MORC4Q8TE76 937 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 DNAAF2Q9NVR5 837 aaKnown RBP15.68■□□□□ 0.1
CLCN1-201ENST00000343257 DMAC2Q9NW81 257 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 PPARGC1AQ9UBK2 798 aaKnown RBP15.68■□□□□ 0.1
CLCN1-201ENST00000343257 VAV3Q9UKW4 847 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 EIF3DO15371 548 aaKnown RBP eCLIP15.68■□□□□ 0.1
CLCN1-201ENST00000343257 PFDN1O60925 122 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 C1orf146Q5VVC0 180 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 LPCAT4Q643R3 524 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 ZCCHC9Q8N567 271 aaKnown RBP15.68■□□□□ 0.1
CLCN1-201ENST00000343257 PYDC1Q8WXC3 89 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 USP6NLQ92738 828 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 FAM111AQ96PZ2 611 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 ECSITQ9BQ95 431 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 NDE1Q9NXR1 346 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 CHMP2BQ9UQN3 213 aa15.68■□□□□ 0.1
CLCN1-201ENST00000343257 SATL1Q86VE3 508 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 SLCO2A1Q92959 643 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 ABTB1Q969K4 478 aaPredicted RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 DDX27Q96GQ7 796 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 FAM210AQ96ND0 272 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 NAP1L4Q99733 375 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 GOLGB1Q14789 3259 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 POTEJP0CG39 1038 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 GZMAP12544 262 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 TCF4P15884 667 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 RASA2Q15283 850 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 CEP128Q6ZU80 1094 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 FAM71AQ8IYT1 594 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 MPP4Q96JB8 637 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 CENPKQ9BS16 269 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 SHCBP1LQ9BZQ2 653 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 PSMC3IPQ9P2W1 217 aaPredicted RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 UVRAGQ9P2Y5 699 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 ZNF212Q9UDV6 495 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 ANGPTL2Q9UKU9 493 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 SCN7AQ01118 1682 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 HARSP12081 509 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 DYNLT1P63172 113 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 ZYXQ15942 572 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 C1orf220Q5T0J3 134 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 RASSF3Q86WH2 238 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 TREML1Q86YW5 311 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 RBM15BQ8NDT2 890 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 HIC2Q96JB3 615 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 PANX3Q96QZ0 392 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 C11orf70Q9BRQ4 267 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 ZWILCHQ9H900 591 aa15.67■□□□□ 0.1
CLCN1-201ENST00000343257 SAE1Q9UBE0 346 aaPredicted RBP15.67■□□□□ 0.1
CLCN1-201ENST00000343257 ARHGAP42A6NI28 874 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 E5RJQ4 531 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 UFL1O94874 794 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 SCNN1DP51172 638 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 CDK16Q00536 496 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 CDC16Q13042 620 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 MYBPC3Q14896 1274 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 ACAD10Q6JQN1 1059 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 FAM192AQ9GZU8 254 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 KCNK13Q9HB14 408 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 ITGB4P16144 1822 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 UMODL1Q5DID0 1318 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 CYP3A7-CYP3A51PA0A087WV96 503 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 TMEM150BA6NC51 233 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 CYP3A7P24462 503 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 MAN1A1P33908 653 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 CACNB3P54284 484 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 ALDH18A1P54886 795 aaKnown RBP15.66■□□□□ 0.1
CLCN1-201ENST00000343257 ALCAMQ13740 583 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 CBWD2Q8IUF1 395 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 MECRQ9BV79 373 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 GINM1Q9NU53 330 aa15.66■□□□□ 0.1
CLCN1-201ENST00000343257 DDX18Q9NVP1 670 aaKnown RBP15.66■□□□□ 0.1
CLCN1-201ENST00000343257 ATXN10Q9UBB4 475 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms