RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 TRPV4Q9HBA0 871 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 CPNE5Q9HCH3 593 aa12.6□□□□□ -0.39
ATXN3-201ENST00000340660 BLACEA4D250 179 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 SERPINF2P08697 491 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 FGRP09769 529 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 IFIT2P09913 472 aaKnown RBP12.59□□□□□ -0.39
ATXN3-201ENST00000340660 ITGB5P18084 799 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 FCHO2Q0JRZ9 810 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
ATXN3-201ENST00000340660 DUOXA1Q1HG43 343 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 C2orf27AQ580R0 203 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 TMEM196Q5HYL7 178 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 ATG14Q6ZNE5 492 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 SYT13Q7L8C5 426 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 ZFYVE19Q96K21 471 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 JPH1Q9HDC5 661 aaPredicted RBP12.59□□□□□ -0.39
ATXN3-201ENST00000340660 NDFIP2Q9NV92 336 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 AKT3Q9Y243 479 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 PCDHGA11Q9Y5H2 935 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 DNMT3AQ9Y6K1 912 aaPredicted RBP12.59□□□□□ -0.39
ATXN3-201ENST00000340660 CACNA1DQ01668 2161 aa12.59□□□□□ -0.39
ATXN3-201ENST00000340660 F8P00451 2351 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 FOXP2O15409 715 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 OIP5O43482 229 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 EGFP01133 1207 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 SKIP12755 728 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 ATP4AP20648 1035 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 ACTR2P61160 394 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 DSC1Q08554 894 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 DMC1Q14565 340 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 PREPLQ4J6C6 727 aaPredicted RBP12.58□□□□□ -0.4
ATXN3-201ENST00000340660 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 ZNF484Q5JVG2 852 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 LPCAT2Q7L5N7 544 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 ZSCAN18Q8TBC5 510 aaPredicted RBP12.58□□□□□ -0.4
ATXN3-201ENST00000340660 BAHD1Q8TBE0 780 aaPredicted RBP12.58□□□□□ -0.4
ATXN3-201ENST00000340660 CHFRQ96EP1 664 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.4
ATXN3-201ENST00000340660 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 SLC9A2Q9UBY0 812 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
ATXN3-201ENST00000340660 MOSPD3O75425 235 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 MICAL2O94851 1124 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 GPC3P51654 580 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 TNK2Q07912 1038 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 YAF2Q8IY57 180 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 CLASRPQ8N2M8 674 aaKnown RBP12.57□□□□□ -0.4
ATXN3-201ENST00000340660 LINC01465Q8N7H1 131 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 FRMD1Q8N878 549 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 MTMR8Q96EF0 704 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 TTC14Q96N46 770 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 LRRC3BQ96PB8 259 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 GAD1Q99259 594 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 CORO1BQ9BR76 489 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
ATXN3-201ENST00000340660 CELSR2Q9HCU4 2923 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 NAV3Q8IVL0 2385 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 PTPN2P17706 415 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 HOXD12P35452 270 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 SLC26A2P50443 739 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 RAB27AP51159 221 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 RASSF3Q86WH2 238 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 RPLP0P6Q8NHW5 317 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 CEP76Q8TAP6 659 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
ATXN3-201ENST00000340660 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 ABHD17AQ96GS6 310 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 SEC62Q99442 399 aaKnown RBP12.56□□□□□ -0.4
ATXN3-201ENST00000340660 NIFKQ9BYG3 293 aaKnown RBP12.56□□□□□ -0.4
ATXN3-201ENST00000340660 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 ANAPC4Q9UJX5 808 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 ATXN7L1Q9ULK2 861 aaPredicted RBP12.56□□□□□ -0.4
ATXN3-201ENST00000340660 PCDHB2Q9Y5E7 798 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
ATXN3-201ENST00000340660 HELZP42694 1942 aaKnown RBP12.55□□□□□ -0.4
ATXN3-201ENST00000340660 ADGRG4Q8IZF6 3080 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 IGKV6D-21A0A0A0MT36 114 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
ATXN3-201ENST00000340660 SUV39H1O43463 412 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 BNIP3LO60238 219 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 DPP6P42658 865 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
ATXN3-201ENST00000340660 PSMD5Q16401 504 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 EML3Q32P44 896 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
ATXN3-201ENST00000340660 LRRC71Q8N4P6 559 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 TSTD1Q8NFU3 115 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 OLIG1Q8TAK6 271 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 RLN3Q8WXF3 142 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 FGF11Q92914 225 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 PGBD4Q96DM1 585 aa12.55□□□□□ -0.4
ATXN3-201ENST00000340660 PRDM16Q9HAZ2 1276 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms