RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TMEM199Q8N511 208 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 ACRBPQ8NEB7 543 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 ADAMTS1Q9UHI8 967 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 INPP5FQ9Y2H2 1132 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 PPP2R2CQ9Y2T4 447 aa8.38□□□□□ -1.07
TMC1-202ENST00000340019 CASTOR2A6NHX0 329 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 PODXLO00592 558 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 B4GALT3O60512 393 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 CLSTN1O94985 981 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 CCDC175P0C221 793 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 CHRNB2P17787 502 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 CD58P19256 250 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 AARSP49588 968 aaKnown RBP eCLIP8.37□□□□□ -1.07
TMC1-202ENST00000340019 TNNC1P63316 161 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 BMS1Q14692 1282 aaKnown RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 SV2CQ496J9 727 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 NPAS4Q8IUM7 802 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 RBBP8NLQ8NC74 664 aaPredicted RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 C3orf58Q8NDZ4 430 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 LNX1Q8TBB1 728 aaPredicted RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 WHAMMQ8TF30 809 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 SLC20A1Q8WUM9 679 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 UROC1Q96N76 676 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 CASD1Q96PB1 797 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 DEF6Q9H4E7 631 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 TBC1D13Q9NVG8 400 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 KANSL3Q9P2N6 904 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 SNX9Q9Y5X1 595 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 PTPRSQ13332 1948 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 ABHD14A-ACY1A0A1B0GW23 586 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 DDX3XO00571 662 aaKnown RBP eCLIP8.37□□□□□ -1.07
TMC1-202ENST00000340019 AKR1B10O60218 316 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 ZNF500O60304 480 aaPredicted RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 CILPO75339 1184 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 DDHD2O94830 711 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 YWHAEP62258 255 aaKnown RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 SOWAHAQ2M3V2 549 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 CD300LGQ6UXG3 332 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 ZNF280BQ86YH2 543 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 REXO1L1PQ8IX06 675 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 RPUSD2Q8IZ73 545 aaKnown RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 URGCPQ8TCY9 931 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 RSPH1Q8WYR4 309 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
TMC1-202ENST00000340019 AGPAT1Q99943 283 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 TSC2P49815 1807 aa8.37□□□□□ -1.07
TMC1-202ENST00000340019 HOXA2O43364 376 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 TACC1O75410 805 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 PDE6CP51160 858 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 RAD23BP54727 409 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 BPIFB4P59827 614 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 CDR2Q01850 454 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 CYP27A1Q02318 531 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 ZNF677Q86XU0 584 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 COLGALT2Q8IYK4 626 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 TTC39CQ8N584 583 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 TWNKQ96RR1 684 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 MMS19Q96T76 1030 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 MRPL45Q9BRJ2 306 aaKnown RBP8.36□□□□□ -1.07
TMC1-202ENST00000340019 HMGXB4Q9UGU5 601 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 NAGPAQ9UK23 515 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 BARX2Q9UMQ3 279 aaPredicted RBP8.36□□□□□ -1.07
TMC1-202ENST00000340019 NME7Q9Y5B8 376 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 A0A0U1RQJ8 604 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 CALCAP01258 141 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 GATMP50440 423 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 KRT83P78385 493 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 FMO1Q01740 532 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 C16orf59Q7L2K0 433 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 DPH6Q7L8W6 267 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 PALB2Q86YC2 1186 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 GLYCTKQ8IVS8 523 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 TOP6BLQ8N6T0 577 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 KBTBD7Q8WVZ9 684 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 ATRIPQ8WXE1 791 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMC1-202ENST00000340019 IL23AQ9NPF7 189 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 TRMT1Q9NXH9 659 aaKnown RBP8.36□□□□□ -1.07
TMC1-202ENST00000340019 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
TMC1-202ENST00000340019 ZSCAN12O43309 604 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 EFCAB14O75071 495 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 DGKIO75912 1065 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 BAIAP3O94812 1187 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 MMEP08473 750 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 FAM163BP0C2L3 166 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 GNA15P30679 374 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 SPA17Q15506 151 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ZNF394Q53GI3 561 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 DCLRE1AQ6PJP8 1040 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 VPS36Q86VN1 386 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 SLC4A11Q8NBS3 891 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 RABGGTAQ92696 567 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 PCDHB18PQ96TA0 734 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ZSWIM1Q9BR11 485 aa8.35□□□□□ -1.07
TMC1-202ENST00000340019 ELOVL4Q9GZR5 314 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms