RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 PRPF39Q86UA1 669 aaKnown RBP13.11□□□□□ -0.31
RIOK3-201ENST00000339486 KCTD17Q8N5Z5 321 aa13.11□□□□□ -0.31
RIOK3-201ENST00000339486 INPP5DQ92835 1189 aa13.11□□□□□ -0.31
RIOK3-201ENST00000339486 PAFAH2Q99487 392 aa13.11□□□□□ -0.31
RIOK3-201ENST00000339486 ARMCX1Q9P291 453 aa13.11□□□□□ -0.31
RIOK3-201ENST00000339486 AGO2Q9UKV8 859 aaKnown RBP13.11□□□□□ -0.31
RIOK3-201ENST00000339486 MAGED2Q9UNF1 606 aaPredicted RBP13.11□□□□□ -0.31
RIOK3-201ENST00000339486 KRT7P08729 469 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 PTGIRP43119 386 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 JAM2P57087 298 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 DCAF12L1Q5VU92 463 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 MCPH1Q8NEM0 835 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 PDP2Q9P2J9 529 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 CASZ1Q86V15 1759 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 F5H423 210 aaPredicted RBP13.1□□□□□ -0.31
RIOK3-201ENST00000339486 MEIS2O14770 477 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 GSTA2P09210 222 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 APOL6Q9BWW8 343 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 PPCSQ9HAB8 311 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 RAVER2Q9HCJ3 691 aaKnown RBP13.1□□□□□ -0.31
RIOK3-201ENST00000339486 KCNH7Q9NS40 1196 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 POLLQ9UGP5 575 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 LOC100653049A0A140TA62 436 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 NOL3O60936 208 aaKnown RBP13.1□□□□□ -0.31
RIOK3-201ENST00000339486 KRT34O76011 436 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 BGNP21810 368 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 SLC34A1Q06495 639 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 TFDP1Q14186 410 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 IZUMO2Q6UXV1 221 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 LRRC74BQ6ZQY2 392 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 MCOLN2Q8IZK6 566 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 FBXO36Q8NEA4 188 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 BTBD10Q9BSF8 475 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 NUF2Q9BZD4 464 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 KLC2Q9H0B6 622 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
RIOK3-201ENST00000339486 DNPEPQ9ULA0 475 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 TRIM49D1C9J1S8 452 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 GJB6O95452 261 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 WEE2P0C1S8 567 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 RBP3P10745 1247 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 JAK3P52333 1124 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 BLMHQ13867 455 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 RASA2Q15283 850 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 SWSAP1Q6NVH7 229 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 ICA1LQ8NDH6 482 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 PCDHB18PQ96TA0 734 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 TRIM56Q9BRZ2 755 aaKnown RBP13.1□□□□□ -0.31
RIOK3-201ENST00000339486 DNAI2Q9GZS0 605 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
RIOK3-201ENST00000339486 MYH6P13533 1939 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 E7ENQ6 273 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 H0YIN7 160 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 KRT36O76013 467 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 ATP6V1C1P21283 382 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TBXAS1P24557 533 aaPredicted RBP13.09□□□□□ -0.31
RIOK3-201ENST00000339486 LAMB3Q13751 1172 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PDE1CQ14123 709 aaPredicted RBP13.09□□□□□ -0.31
RIOK3-201ENST00000339486 IRGCQ6NXR0 463 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 CPNE8Q86YQ8 564 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SLC25A41Q8N5S1 370 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PAF1Q8N7H5 531 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SCYL1Q96KG9 808 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TMEM109Q9BVC6 243 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 EBF2Q9HAK2 575 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SMYD2Q9NRG4 433 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 ZHX2Q9Y6X8 837 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 DPPA5A6NC42 116 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 SKIV2L2P42285 1042 aaKnown RBP13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PDCD2Q16342 344 aaPredicted RBP13.09□□□□□ -0.31
RIOK3-201ENST00000339486 LRRC6Q86X45 466 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 ZBTB8OSQ8IWT0 167 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 THNSL1Q8IYQ7 743 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 FAM71DQ8N9W8 422 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 RIT2Q99578 217 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 PCMTD2Q9NV79 361 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 DNALI1O14645 258 aaPredicted RBP13.09□□□□□ -0.31
RIOK3-201ENST00000339486 APRTP07741 180 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 KRT3P12035 628 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 CDH6P55285 790 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 ROR1Q01973 937 aa13.09□□□□□ -0.31
RIOK3-201ENST00000339486 STX3Q13277 289 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms