RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TWNKQ96RR1 684 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 CITO14578 2027 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 SEPT4O43236 478 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 SPOPO43791 374 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 MYBL2P10244 700 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 ITGA4P13612 1032 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 SP3Q02447 781 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 DEFB115Q30KQ5 88 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 KLK14Q9P0G3 267 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 TRIP11Q15643 1979 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 FGGP02679 453 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 GDF6Q6KF10 455 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 RASGEF1CQ8N431 466 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 C18orf25Q96B23 403 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 SNX27Q96L92 541 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 RNF39Q9H2S5 420 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 TUBGCP4Q9UGJ1 667 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 TMEM59LQ9UK28 342 aa23.88■■□□□ 1.41
PDLIM2-203ENST00000339162 PPEF2O14830 753 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 ERLIN1O75477 346 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 RECQL4O94761 1208 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 TOMM70O94826 608 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 PRKAR2AP13861 404 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 CRYBB1P53674 252 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 DAB2IPQ5VWQ8 1189 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 HNRNPLLQ8WVV9 542 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 WNT8BQ93098 351 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 RNPC3Q96LT9 517 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 SPC25Q9HBM1 224 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 ITGA11Q9UKX5 1188 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 KRIT1O00522 736 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 YARSP54577 528 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 RAD23BP54727 409 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 RBP5P82980 135 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 PTP4A2Q12974 167 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 WHAMMQ8TF30 809 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 CALR3Q96L12 384 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 GDAP1L1Q96MZ0 367 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 RPS6KC1Q96S38 1066 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 XPNPEP3Q9NQH7 507 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 AVENQ9NQS1 362 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 GTF2IRD1Q9UHL9 959 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 NR2E1Q9Y466 385 aa23.87■■□□□ 1.41
PDLIM2-203ENST00000339162 ZSCAN5CA6NGD5 496 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 TRPA1O75762 1119 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 CTSHP09668 335 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 MYBL1P10243 752 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 ATICP31939 592 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 APBB1IPQ7Z5R6 666 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 PHF13Q86YI8 300 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 WDTC1Q8N5D0 677 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 TRIM11Q96F44 468 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 FUT8Q9BYC5 575 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 CARD9Q9H257 536 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 YWHAEP62258 255 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 UBL4BQ8N7F7 174 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 CD101Q93033 1021 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 CELF4Q9BZC1 486 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 ELOVL4Q9GZR5 314 aa23.86■■□□□ 1.41
PDLIM2-203ENST00000339162 KPNA6O60684 536 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 ADAMTS4O75173 837 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 TUBBP07437 444 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 GLI1P08151 1106 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 PEX5P50542 639 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 MAMLD1Q13495 774 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 PCBP1Q15365 356 aaKnown RBP eCLIP23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 UBXN11Q5T124 520 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 LIN9Q5TKA1 542 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 DENND1BQ6P3S1 775 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 CD302Q8IX05 232 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 NME8Q8N427 588 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 SLC4A11Q8NBS3 891 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 DDX47Q9H0S4 455 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 UPF3AQ9H1J1 476 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 PLEKHA5Q9HAU0 1116 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 STIM2Q9P246 746 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 PARP2Q9UGN5 583 aa23.85■■□□□ 1.41
PDLIM2-203ENST00000339162 MIF4GDA9UHW6 222 aaKnown RBP23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 ASGR1P07306 291 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 MMP8P22894 467 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 CBX1P83916 185 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 TAF2Q6P1X5 1199 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 DPH6Q7L8W6 267 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 VRTNQ9H8Y1 702 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 ESYT3A0FGR9 886 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 CILPO75339 1184 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 TNNC1P63316 161 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 LLGL1Q15334 1064 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 KCNA10Q16322 511 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 CCNI2Q6ZMN8 369 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 FAM228AQ86W67 206 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 NT5DC4Q86YG4 428 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 WNT8AQ9H1J5 351 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 L1RE1Q9UN81 338 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 CDY2AQ9Y6F7 541 aa23.84■■□□□ 1.41
PDLIM2-203ENST00000339162 MYO1FO00160 1098 aa23.83■■□□□ 1.41
PDLIM2-203ENST00000339162 RAD51CO43502 376 aa23.83■■□□□ 1.41
PDLIM2-203ENST00000339162 AXLP30530 894 aa23.83■■□□□ 1.41
PDLIM2-203ENST00000339162 C1QBPQ07021 282 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-203ENST00000339162 ALKAL1Q6UXT8 129 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms