RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 STAT3P40763 770 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 COX10Q12887 443 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 Q4G0T1 1027 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 SLC10A5Q5PT55 438 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 SNX30Q5VWJ9 437 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 TSHZ1Q6ZSZ6 1077 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 FAM111AQ96PZ2 611 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 TBX22Q9Y458 520 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 SAC3D1A6NKF1 404 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 DDX5P17844 614 aaKnown RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 RFC5P40937 340 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 MTM1Q13496 603 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 GTF2H3Q13889 308 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 C12orf60Q5U649 245 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 RTL3Q8N8U3 475 aaKnown RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 RBBP8NLQ8NC74 664 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 RBBP8Q99708 897 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 TRIM39Q9HCM9 518 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 TBKBP1A7MCY6 615 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 PSTPIP1O43586 416 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 MOCS2O96007 188 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 LCP1P13796 627 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 JAK3P52333 1124 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 KLHL17Q6TDP4 642 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 BNC2Q6ZN30 1099 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 UBASH3BQ8TF42 649 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 SERPINB13Q9UIV8 391 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 TFR2Q9UP52 801 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 BICRAQ9NZM4 1560 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 AHCYL1O43865 530 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 CALB2P22676 271 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 NAB2Q15742 525 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 MROH9Q5TGP6 573 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 TTC23LQ6PF05 361 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 MTDHQ86UE4 582 aaKnown RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 ZCCHC7Q8N3Z6 543 aaKnown RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 ASIC4Q96FT7 647 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 ECSITQ9BQ95 431 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 HDHD2Q9H0R4 259 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 CLEC4MQ9H2X3 399 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 CD274Q9NZQ7 290 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 ADD3Q9UEY8 706 aaKnown RBP10.24□□□□□ -0.77
COL4A6-201ENST00000334504 C15orf41Q9Y2V0 281 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 O00370 1275 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 KHDRBS2Q5VWX1 349 aaKnown RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 RNF219Q5W0B1 726 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ENOSF1Q7L5Y1 443 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 SIK2Q9H0K1 926 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 TAGLN3Q9UI15 199 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ATP10BO94823 1461 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 FAM25AB3EWG3 89 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 FAM25CB3EWG5 89 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 FAM25GB3EWG6 89 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ERVV-2B6SEH9 535 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF862O60290 1169 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 TSPAN9O75954 239 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 MYL3P08590 195 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 CDK8P49336 464 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 KLK7P49862 253 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 PTPN12Q05209 780 aaKnown RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 AP3B2Q13367 1082 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF568Q3ZCX4 644 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ARMC3Q5W041 872 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 SCN4BQ8IWT1 228 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 THEM5Q8N1Q8 247 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 FAM129AQ9BZQ8 928 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 MRGBPQ9NV56 204 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 STK39Q9UEW8 545 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 MAP3K15Q6ZN16 1313 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 TRPC5OSA6NMA1 111 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 H2AFXP16104 143 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 SPRP35270 261 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 RECQLP46063 649 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 KCNJ1P48048 391 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 TNFAIP2Q03169 654 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ZFP42Q96MM3 310 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 C6orf62Q9GZU0 229 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 EPS8L2Q9H6S3 715 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 PTPRTO14522 1441 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 SSU72P8A0A1W2PR75 194 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 PIPSLA2A3N6 862 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 SASH1O94885 1247 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 THRAP10827 490 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 PTPN4P29074 926 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 CDC25CP30307 473 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 COILP38432 576 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 PLIN5Q00G26 463 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 CLVS1Q8IUQ0 354 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 TMEM120AQ9BXJ8 343 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 MRPL39Q9NYK5 338 aaKnown RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 UNC13AQ9UPW8 1703 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 USP17L5A8MUK1 530 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 HUS1O60921 280 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 HSMCR30P0CW71 290 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms