RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TAF1DQ9H5J8 278 aaPredicted RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 FAM8A1Q9UBU6 413 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 HMGB1P1B2RPK0 211 aaPredicted RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 HSPA4LO95757 839 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 TMPRSS15P98073 1019 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 SP3Q02447 781 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 SYCP2LQ5T4T6 812 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 E4F1Q66K89 784 aaPredicted RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 RSRC1Q96IZ7 334 aaKnown RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 OSBPL8Q9BZF1 889 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 SNTG2Q9NY99 539 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 H7C4K7 107 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 NVLO15381 856 aaKnown RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 UBA1P22314 1058 aaKnown RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 CYP24A1Q07973 514 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 PPME1Q9Y570 386 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 ADCY3O60266 1144 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 URODP06132 367 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 MYL6P60660 151 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 CCZ1BP86790 482 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 CCZ1P86791 482 aaPredicted RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 YWHAHQ04917 246 aaPredicted RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 SV2AQ7L0J3 742 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 SYN2Q92777 582 aaPredicted RBP15.78■□□□□ 0.12
C9orf47-201ENST00000334490 DDIT4Q9NX09 232 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 HACD3Q9P035 362 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 MRC1P22897 1456 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 CASTOR2A6NHX0 329 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 ZNF189O75820 626 aaPredicted RBP15.77■□□□□ 0.12
C9orf47-201ENST00000334490 BAG2O95816 211 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 FKBP1BP68106 108 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 ANO4Q32M45 955 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 SPATS2Q86XZ4 545 aaKnown RBP15.77■□□□□ 0.12
C9orf47-201ENST00000334490 ADGRF2Q8IZF7 708 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 CYFIP2Q96F07 1278 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 MS4A14Q96JA4 679 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 RAB6BQ9NRW1 208 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 TMEM39AQ9NV64 488 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 KIAA1257Q9ULG3 409 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 A0A087WUV0 522 aaPredicted RBP15.77■□□□□ 0.12
C9orf47-201ENST00000334490 ZNF185O15231 689 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 VDRP11473 427 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 EVX2Q03828 476 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 IFT88Q13099 833 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
C9orf47-201ENST00000334490 ZBTB39O15060 712 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 POMCP01189 267 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 ALDH2P05091 517 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 LGALS2P05162 132 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 CYP3A4P08684 503 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 ST3GAL1Q11201 340 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 TMC7Q7Z402 723 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 PGBD3Q8N328 593 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 COPS5Q92905 334 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 PLAGL2Q9UPG8 496 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 SIGLEC1Q9BZZ2 1709 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 OCRLQ01968 901 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 SPARCL1Q14515 664 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 HIF1AQ16665 826 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 PRAMEF19Q5SWL8 479 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 NUGGCQ68CJ6 796 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 CXCL17Q6UXB2 119 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 WDR49Q8IV35 697 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 NDFIP2Q9NV92 336 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 GTF3C4Q9UKN8 822 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 USP20Q9Y2K6 914 aa15.77■□□□□ 0.11
C9orf47-201ENST00000334490 CST8O60676 142 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 ZWINTO95229 277 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 SGPL1O95470 568 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 NCF2P19878 526 aaPredicted RBP15.76■□□□□ 0.11
C9orf47-201ENST00000334490 DGKZQ13574 1117 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 ARHGAP15Q53QZ3 475 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 MIB1Q86YT6 1006 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 MAML1Q92585 1016 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 BHMTQ93088 406 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 PURBQ96QR8 312 aaKnown RBP15.76■□□□□ 0.11
C9orf47-201ENST00000334490 CATSPERBQ9H7T0 1116 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 RSAD1Q9HA92 442 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 CAPN7Q9Y6W3 813 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 FBXO47Q5MNV8 452 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 ACAD10Q6JQN1 1059 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 ARHGAP18Q8N392 663 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 CAMKK2Q96RR4 588 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 ENTPD7Q9NQZ7 604 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 M0QYT0 321 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 AKAP5P24588 427 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 EPHB2P29323 1055 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 CDR2Q01850 454 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 CCNYL1Q8N7R7 359 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 SPIRE2Q8WWL2 714 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 GOLPH3Q9H4A6 298 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.76■□□□□ 0.11
C9orf47-201ENST00000334490 ZFATQ9P243 1243 aa15.76■□□□□ 0.11
C9orf47-201ENST00000334490 SLC15A5A6NIM6 579 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 YDJCA8MPS7 323 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 MCF2P10911 925 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms