RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FKBP14Q9NWM8 211 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 KIAA1210Q9ULL0 1709 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PALLDQ8WX93 1383 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 F8W031 263 aaPredicted RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SNPHO15079 494 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 TIMM44O43615 452 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SNAP91O60641 907 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SRGAP2O75044 1071 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PDGFRBP09619 1106 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 BCAR1P56945 870 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 STXBP2Q15833 593 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 IYDQ6PHW0 289 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 APPL2Q8NEU8 664 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PSMA8Q8TAA3 256 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PARD3BQ8TEW8 1205 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 FOPNLQ96NB1 174 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 LMCD1Q9NZU5 365 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 STK39Q9UEW8 545 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ZC3H7BQ9UGR2 993 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ATP10BO94823 1461 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 M0R2C6 588 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 GNA15P30679 374 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 NCALDP61601 193 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 DDR2Q16832 855 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 KBTBD8Q8NFY9 601 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 RNF139Q8WU17 664 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ARL8AQ96BM9 186 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 WDR24Q96S15 920 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 MMTAG2Q9BU76 263 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PRDM16Q9HAZ2 1276 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SH3BP4Q9P0V3 963 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 NSFL1CQ9UNZ2 370 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 XDHP47989 1333 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 MROH7Q68CQ1 1323 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 MYO1GB0I1T2 1018 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 VIL1P09327 827 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PPARDQ03181 441 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 LRRC74BQ6ZQY2 392 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 AKAP14Q86UN6 197 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 DGKHQ86XP1 1220 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PPM1NQ8N819 430 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 GCNAQ96QF7 691 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 EGFL8Q99944 293 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ILKAPQ9H0C8 392 aaPredicted RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CYP39A1Q9NYL5 469 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 GOLGA8SH3BPF8 625 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SKIV2L2P42285 1042 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 MAEAQ7L5Y9 396 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 FAM160B2Q86V87 743 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ACTRT1Q8TDG2 376 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ASB2Q96Q27 587 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 NAT9Q9BTE0 207 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 INO80BQ9C086 356 aaPredicted RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 MAGEE1Q9HCI5 957 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CCNB1IP1Q9NPC3 277 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 C15orf38-AP3S2A0A0A6YYH1 394 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ATP9AO75110 1047 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ATP1A3P13637 1013 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CHN2P52757 468 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 LRRC36Q1X8D7 754 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ARPINQ7Z6K5 226 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 THEM5Q8N1Q8 247 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 EYA1Q99502 592 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 STK33Q9BYT3 514 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 KCNF1Q9H3M0 494 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ARHGEF3Q9NR81 526 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PHTF1Q9UMS5 762 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CORO2BQ9UQ03 480 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 WWP2O00308 870 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PHKA2P46019 1235 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CACNA2D1P54289 1103 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 EIF4A1P60842 406 aaKnown RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ITGB3BPQ13352 177 aaPredicted RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CCDC144BQ3MJ40 725 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CERKLQ49MI3 558 aaPredicted RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 TP53INP1Q96A56 240 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 TRIM51Q9BSJ1 452 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CASZ1Q86V15 1759 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 PRAMEP78395 509 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 CHRNB3Q05901 458 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SPIRE1Q08AE8 756 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 C11orf63Q6NUN7 778 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SMYD4Q8IYR2 804 aaPredicted RBP5.76□□□□□ -1.49
PTPRB-202ENST00000334414 SCFD2Q8WU76 684 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 KRT84Q9NSB2 600 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 ING3Q9NXR8 418 aa5.76□□□□□ -1.49
PTPRB-202ENST00000334414 B2RBV5 119 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 TMEM253P0C7T8 217 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 RPL22P35268 128 aaKnown RBP5.75□□□□□ -1.49
PTPRB-202ENST00000334414 AP1S2P56377 157 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 TTC23LQ6PF05 361 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 JAMLQ86YT9 394 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 PTPRN2Q92932 1015 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 AGPAT1Q99943 283 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 R3HDM2Q9Y2K5 976 aaKnown RBP5.75□□□□□ -1.49
PTPRB-202ENST00000334414 ERVK-7P63135 1459 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 CCDC166P0CW27 439 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 ACADVLP49748 655 aa5.75□□□□□ -1.49
PTPRB-202ENST00000334414 ATP2C1P98194 919 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms