RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 BRD2P25440 801 aaKnown RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 ARHGAP25P42331 645 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 EIF3EP60228 445 aaKnown RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 TSTA3Q13630 321 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 NT5DC1Q5TFE4 455 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 CCDC137Q6PK04 289 aaKnown RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 C1orf186Q6ZWK4 172 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 PARD3BQ8TEW8 1205 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 PARD6BQ9BYG5 372 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 SLC12A3P55017 1021 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 RTP1P59025 263 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 NR1H3Q13133 447 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 KLHL38Q2WGJ6 581 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 TAS1R2Q8TE23 839 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 CYFIP2Q96F07 1278 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 CFAP36Q96G28 342 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 SNX12Q9UMY4 172 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 FOXN3O00409 490 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 LYPLA2O95372 231 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 LSM8O95777 96 aaKnown RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 KRT14P02533 472 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 FUT2Q10981 343 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 BTG3Q14201 252 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 PSMD6Q15008 389 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 TMED2Q15363 201 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 TMC7Q7Z402 723 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 ATP6V0D2Q8N8Y2 350 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 KIAA0895Q8NCT3 520 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 PPFIBP2Q8ND30 876 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 SLC7A14Q8TBB6 771 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 UBA3Q8TBC4 463 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 FTHL17Q9BXU8 183 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 PDGFDQ9GZP0 370 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 NMRK2Q9NPI5 230 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
POLR1B-202ENST00000333990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.81□□□□□ -0.52
POLR1B-202ENST00000333990 FAM237AA0A1B0GTK4 181 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 SRGAP2O75044 1071 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 NCAM1P13591 858 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 GPS1Q13098 491 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 LAMB3Q13751 1172 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 IKBKEQ14164 716 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 MTF1Q14872 753 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 P3H1Q32P28 736 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 PAN2Q504Q3 1202 aaKnown RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 CDKAL1Q5VV42 579 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 SRRM1Q8IYB3 904 aaKnown RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 DDX47Q9H0S4 455 aaKnown RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 CNOT10Q9H9A5 744 aaKnown RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 A0A0G2JLL6 359 aaPredicted RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 SARSP49591 514 aaKnown RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 GNGT1P63211 74 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 PRAMEP78395 509 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 C10orf120Q5SQS8 335 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 PRRT2Q7Z6L0 340 aaPredicted RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 CHSY1Q86X52 802 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 CACNA2D3Q8IZS8 1091 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 COPS5Q92905 334 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 TMEM117Q9H0C3 514 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 NFU1Q9UMS0 254 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 EEF2KO00418 725 aaKnown RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 C2CD2LO14523 706 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 PGK1P00558 417 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 SLC11A2P49281 568 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 MYL6P60660 151 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 SLC7A5Q01650 507 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 ACOT1Q86TX2 421 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 USP38Q8NB14 1042 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 CAPS2Q9BXY5 557 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 CISHQ9NSE2 258 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
POLR1B-202ENST00000333990 MORC2Q9Y6X9 1032 aaPredicted RBP11.8□□□□□ -0.52
POLR1B-202ENST00000333990 IGKV6D-41A0A0C4DH26 115 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 PIK3R2O00459 728 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 CA12O43570 354 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 SOX10P56693 466 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 PDK1Q15118 436 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 OVOS1Q6IE37 1185 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 SPOPLQ6IQ16 392 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 C1orf131Q8NDD1 294 aaKnown RBP11.79□□□□□ -0.52
POLR1B-202ENST00000333990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
POLR1B-202ENST00000333990 KRT35Q92764 455 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 SENP6Q9GZR1 1112 aaPredicted RBP11.79□□□□□ -0.52
POLR1B-202ENST00000333990 TRPM5Q9NZQ8 1165 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 COL1A2P08123 1366 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 C3orf70A6NLC5 250 aaPredicted RBP11.79□□□□□ -0.52
POLR1B-202ENST00000333990 SMAPO00193 183 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 GRK4P32298 578 aa11.79□□□□□ -0.52
POLR1B-202ENST00000333990 GCNT1Q02742 428 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms