RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 FOXP3Q9BZS1 431 aa15.27■□□□□ 0.03
SNX20-202ENST00000330943 AVENQ9NQS1 362 aaPredicted RBP15.27■□□□□ 0.03
SNX20-202ENST00000330943 ARL8BQ9NVJ2 186 aa15.27■□□□□ 0.03
SNX20-202ENST00000330943 SCOCQ9UIL1 159 aa15.27■□□□□ 0.03
SNX20-202ENST00000330943 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.03
SNX20-202ENST00000330943 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.03
SNX20-202ENST00000330943 ANKRD33BA6NCL7 494 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 CAPN9O14815 690 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ECE2O60344 883 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 BBOX1O75936 387 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ARSEP51690 589 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 LMNB2Q03252 620 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 SEPT7Q16181 437 aaKnown RBP15.26■□□□□ 0.03
SNX20-202ENST00000330943 SPDYAQ5MJ70 313 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 CCDC174Q6PII3 467 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNX20-202ENST00000330943 DTX3LQ8TDB6 740 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 FAM81BQ96LP2 452 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 COA1Q9GZY4 146 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 RAB20Q9NX57 234 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ANKFY1Q9P2R3 1169 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 PSMC3IPQ9P2W1 217 aaPredicted RBP15.26■□□□□ 0.03
SNX20-202ENST00000330943 DNPEPQ9ULA0 475 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ZBTB21Q9ULJ3 1066 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 UMODL1Q5DID0 1318 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 SIGLEC16A6NMB1 481 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 PI4K2BG5E9Z4 385 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
SNX20-202ENST00000330943 CCDC22O60826 627 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ATP9AO75110 1047 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 BANF1O75531 89 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 PIAS1O75925 651 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 HAUS5O94927 633 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 SKIP12755 728 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 KRT10P13645 584 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 GPC3P51654 580 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 NOP14P78316 857 aaKnown RBP15.26■□□□□ 0.03
SNX20-202ENST00000330943 GPS1Q13098 491 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 ACSBG2Q5FVE4 666 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 PPP1R15BQ5SWA1 713 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 GALNT15Q8N3T1 639 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 BTBD10Q9BSF8 475 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 C12orf65Q9H3J6 166 aaKnown RBP15.26■□□□□ 0.03
SNX20-202ENST00000330943 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 KANSL3Q9P2N6 904 aa15.26■□□□□ 0.03
SNX20-202ENST00000330943 PMM2O15305 246 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 GYG2O15488 501 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 HNRNPCL1O60812 293 aaKnown RBP15.25■□□□□ 0.03
SNX20-202ENST00000330943 APBA3O96018 575 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 MMP10P09238 476 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 BRD2P25440 801 aaKnown RBP15.25■□□□□ 0.03
SNX20-202ENST00000330943 PIK3CAP42336 1068 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 NSFP46459 744 aaKnown RBP15.25■□□□□ 0.03
SNX20-202ENST00000330943 PEX3P56589 373 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 OR52E8Q6IFG1 317 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 MIER3Q7Z3K6 550 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 ANKMY2Q8IV38 441 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 PHC3Q8NDX5 983 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 CERKQ8TCT0 537 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 MCUR1Q96AQ8 359 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 HEY2Q9UBP5 337 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 TMEM150BA6NC51 233 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 PSTPIP1O43586 416 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 CETN2P41208 172 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 POLE2P56282 527 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 LRRC74BQ6ZQY2 392 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 SCYL3Q8IZE3 742 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
SNX20-202ENST00000330943 ALG13Q9NP73 1137 aaKnown RBP15.25■□□□□ 0.03
SNX20-202ENST00000330943 SIPA1L1O43166 1804 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 GOLGA8MH3BSY2 632 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 GSC2O15499 205 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 ATF7P17544 494 aaPredicted RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 KCNA3P22001 575 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 CHRNA5P30532 468 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 SSTR3P32745 418 aaPredicted RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 GTF2BQ00403 316 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 PTP4A2Q12974 167 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 PDIA2Q13087 525 aaKnown RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 EFTUD2Q15029 972 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNX20-202ENST00000330943 HHIPL2Q6UWX4 724 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 KATNAL2Q8IYT4 538 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 VPS52Q8N1B4 723 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 ZC3H12CQ9C0D7 883 aaKnown RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 WDR35Q9P2L0 1181 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 COQ4Q9Y3A0 265 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 MYPNQ86TC9 1320 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 GOLGA8RI6L899 631 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
SNX20-202ENST00000330943 LIASO43766 372 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 ZWINTO95229 277 aa15.24■□□□□ 0.03
SNX20-202ENST00000330943 MAPTP10636 758 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms