RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TADA2BQ86TJ2 420 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 CCDC125Q86Z20 511 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 SULF1Q8IWU6 871 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 CENPTQ96BT3 561 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 DCPSQ96C86 337 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 CLMNQ96JQ2 1002 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 DDX23Q9BUQ8 820 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 C2orf40Q9H1Z8 148 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 ADARB2Q9NS39 739 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 CISHQ9NSE2 258 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 TMEM191CA6NGB0 347 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 LSM8O95777 96 aaKnown RBP15.45■□□□□ 0.06
TPM3-206ENST00000330188 HOXC6P09630 235 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 TMEM191BP0C7N4 346 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 GJC1P36383 396 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 ITGA8P53708 1063 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 SGSM1Q2NKQ1 1148 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 ERMARDQ5T6L9 678 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 KCNV1Q6PIU1 500 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 MICALCLQ6ZW33 695 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 EXOC8Q8IYI6 725 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 PPM1EQ8WY54 764 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 MPHOSPH6Q99547 160 aaKnown RBP15.45■□□□□ 0.06
TPM3-206ENST00000330188 PTPRHQ9HD43 1115 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 GGA2Q9UJY4 613 aa15.45■□□□□ 0.06
TPM3-206ENST00000330188 DNAJC25-GNG10A0A024R161 153 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 C5orf60A6NFR6 353 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 RASGRF2O14827 1237 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 MEFVO15553 781 aaPredicted RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 CALB1P05937 261 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ATF2P15336 505 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 SSR1P43307 286 aaKnown RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 CDR1P51861 262 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ZNF252P-AS1Q0IIN9 211 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 AUHQ13825 339 aaKnown RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 QPCTQ16769 361 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 Q3C1V9 767 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ZNF394Q53GI3 561 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 MPZL3Q6UWV2 235 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 TSHZ1Q6ZSZ6 1077 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ERO1BQ86YB8 467 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 FBXO16Q8IX29 292 aaPredicted RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 TRAPPC12Q8WVT3 735 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 XPO6Q96QU8 1125 aaKnown RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 FAM118BQ9BPY3 351 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ROPN1BQ9BZX4 212 aaPredicted RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 ROPN1Q9HAT0 212 aaPredicted RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 AGTPBP1Q9UPW5 1226 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 CXCL11O14625 94 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 GJB1P08034 283 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 CHN1P15882 459 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 TCF4P15884 667 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 SLCO1A2P46721 670 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
TPM3-206ENST00000330188 CAV1Q03135 178 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 TRPC3Q13507 836 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ATP13A4Q4VNC1 1196 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 MFSD5Q6N075 450 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 CCDC62Q6P9F0 684 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 SPATA33Q96N06 139 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 SCLT1Q96NL6 688 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 SELENOSQ9BQE4 189 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 XYLT2Q9H1B5 865 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 FZD8Q9H461 694 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
TPM3-206ENST00000330188 ACKR2O00590 384 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 CPP00450 1065 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 CDH5P33151 784 aaPredicted RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 ADCY8P40145 1251 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 ASPAP45381 313 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 NFX1Q12986 1120 aaKnown RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 ATF7IP2Q5U623 682 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 C6orf89Q6UWU4 347 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 SCARA5Q6ZMJ2 495 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 YTHDF3Q7Z739 585 aaKnown RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 DHX37Q8IY37 1157 aaKnown RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 THNSL1Q8IYQ7 743 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 TMEM35BQ8NCS4 154 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 ATXN2LQ8WWM7 1075 aaKnown RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 COPS5Q92905 334 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 ZNF668Q96K58 619 aaPredicted RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 MCEEQ96PE7 176 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 MMP19Q99542 508 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 KLHL11Q9NVR0 708 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 DDX20Q9UHI6 824 aaKnown RBP15.43■□□□□ 0.06
TPM3-206ENST00000330188 ANAPC5Q9UJX4 755 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 PCDHGC3Q9UN70 934 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 B4GALT5O43286 388 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 B4GALT4O60513 344 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 KIAA0754O94854 1291 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 ACSL3O95573 720 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 WEE2P0C1S8 567 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 VPS41P49754 854 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 LIG3P49916 1009 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 OGDHQ02218 1023 aa15.43■□□□□ 0.06
TPM3-206ENST00000330188 PPP1R15BQ5SWA1 713 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms