RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 OSTM1Q86WC4 334 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 DNAAF5Q86Y56 855 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 ALDH16A1Q8IZ83 802 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 PROM2Q8N271 834 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 ACTRT2Q8TDY3 377 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 PTCD3Q96EY7 689 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 MRPL1Q9BYD6 325 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 TMEM60Q9H2L4 133 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 UVRAGQ9P2Y5 699 aa12.49□□□□□ -0.41
SHMT2-201ENST00000328923 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
SHMT2-201ENST00000328923 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 LAMB1P07942 1786 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 PVALEFA0A1B0GWK0 134 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-201ENST00000328923 S100BP04271 92 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-201ENST00000328923 CHRNB1P11230 501 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 FCER1AP12319 257 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 ZBTB17Q13105 803 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 NCOA4Q13772 614 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 SEPT6Q14141 434 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 SF3B4Q15427 424 aaKnown RBP eCLIP12.48□□□□□ -0.413e-8■■■■■ 35.5
SHMT2-201ENST00000328923 CRY1Q16526 586 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 MMEL1Q495T6 779 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 IL23RQ5VWK5 629 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 GOLM1Q8NBJ4 401 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 FAM161BQ96MY7 647 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHMT2-201ENST00000328923 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 SLC38A7Q9NVC3 462 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 ZDHHC7Q9NXF8 308 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 MYOCOSA0A1B0GUC4 107 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 A8MXQ7 604 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 ESRRAP11474 423 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-201ENST00000328923 GSSP48637 474 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 MXI1P50539 228 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 PHKG1Q16816 387 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 LRRC55Q6ZSA7 311 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 ARHGEF18Q6ZSZ5 1173 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 AMIGO3Q86WK7 504 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 CENPSQ8N2Z9 138 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 CDK5RAP3Q96JB5 506 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
SHMT2-201ENST00000328923 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 TLR2O60603 784 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 HNRNPCL1O60812 293 aaKnown RBP12.47□□□□□ -0.41
SHMT2-201ENST00000328923 BCAMP50895 628 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 WDR4P57081 412 aaKnown RBP12.47□□□□□ -0.41
SHMT2-201ENST00000328923 ATP1A4Q13733 1029 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 PRKG1Q13976 671 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 KCNJ8Q15842 424 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 RFPL4BQ6ZWI9 263 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 ZNF410Q86VK4 478 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 CCDC25Q86WR0 208 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 RASGEF1CQ8N431 466 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 TRPC4APQ8TEL6 797 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 MKNK1Q9BUB5 465 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 TANGO6Q9C0B7 1094 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 RRN3Q9NYV6 651 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 TAS2R1Q9NYW7 299 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 GRHL1Q9NZI5 618 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 PCDHGB4Q9UN71 923 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 PCDHGB5Q9Y5G0 923 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 A0A087X0T9 212 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 TMEM114B3SHH9 223 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
SHMT2-201ENST00000328923 AP1G1O43747 822 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 ACSL3O95573 720 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 FGGP02679 453 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 FAM228BP0C875 321 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 CDH2P19022 906 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-201ENST00000328923 LMNB1P20700 586 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 ENPP1P22413 925 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 SLC16A2P36021 539 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 PGM1P36871 562 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 PHKA2P46019 1235 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 AP2B1P63010 937 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 ANKRD20A4Q4UJ75 823 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 SLC45A4Q5BKX6 768 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 KIAA1755Q5JYT7 1200 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 TMTC4Q5T4D3 741 aa12.47□□□□□ -0.41
SHMT2-201ENST00000328923 RIPOR1Q6ZS17 1223 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms