RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SYNPO2Q9UMS6 1093 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 DHX15O43143 795 aaKnown RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ALX1Q15699 326 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 URGCPQ8TCY9 931 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ANAPC7Q9UJX3 599 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ADCY6O43306 1168 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 COBLO75128 1261 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 CDH3P22223 829 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 BEND6Q5SZJ8 279 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 MZT2BQ6NZ67 158 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF556Q9HAH1 456 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 PLAAQ9Y263 795 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 GIT1Q9Y2X7 761 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 NRKQ7Z2Y5 1582 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 CRTAPO75718 401 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ACSL3O95573 720 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 SDC4P31431 198 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 PRKG2Q13237 762 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 NCF4Q15080 339 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 GATAD2BQ8WXI9 593 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 EME1Q96AY2 570 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 VPS50Q96JG6 964 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 CHID1Q9BWS9 393 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 MTSS1O43312 755 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 EFNA5P52803 228 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 SUGP1Q8IWZ8 645 aaKnown RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 FAM92AA1XBS5 289 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 STAT3P40763 770 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 PRELPP51888 382 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 RAD51Q06609 339 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 C2orf54Q08AI8 447 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF772Q68DY9 489 aaPredicted RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 PLEKHF1Q96S99 279 aa10.15□□□□□ -0.78
COL12A1-201ENST00000322507 OLA1Q9NTK5 396 aaKnown RBP10.15□□□□□ -0.78
COL12A1-201ENST00000322507 MYH7P12883 1935 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.79
COL12A1-201ENST00000322507 HAVCR1Q96D42 359 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 SERHL2Q9H4I8 314 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 SERHLQ9NQF3 203 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 VIRMAQ69YN4 1812 aaKnown RBP10.15□□□□□ -0.79
COL12A1-201ENST00000322507 PIK3R1P27986 724 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 SARSP49591 514 aaKnown RBP10.15□□□□□ -0.79
COL12A1-201ENST00000322507 NFYCQ13952 458 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 PFKFB3Q16875 520 aaPredicted RBP10.15□□□□□ -0.79
COL12A1-201ENST00000322507 TTC33Q6PID6 262 aaPredicted RBP10.15□□□□□ -0.79
COL12A1-201ENST00000322507 TMEM110Q86TL2 294 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 OR8H2Q8N162 312 aa10.15□□□□□ -0.79
COL12A1-201ENST00000322507 MYH8P13535 1937 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 M0R2C6 588 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PAX3P23760 479 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 STARP49675 285 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 AKAP14Q86UN6 197 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 HUS1O60921 280 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 RGS2P41220 211 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PDZK1Q5T2W1 519 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 GREM2Q9H772 168 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 IFT43Q96FT9 208 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 SPEF1Q9Y4P9 236 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 SOWAHDA6NJG2 315 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ENC1O14682 589 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 RAB15P59190 212 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 MPP2Q14168 576 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 IMPG1Q17R60 797 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF827Q17R98 1081 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ASAP3Q8TDY4 903 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 LIN7AO14910 233 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PGM1P36871 562 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 FLT3P36888 993 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 C16orf62Q7Z3J2 963 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 S100ZQ8WXG8 99 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 CCDC182A6NF36 153 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 HSD17B4P51659 736 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ATP6V1G3Q96LB4 118 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF560Q96MR9 790 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PNO1Q9NRX1 252 aaKnown RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 FAM153AQ9UHL3 310 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 NOS1APO75052 506 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 KCNQ4P56696 695 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 MTMR1Q13613 665 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PCDHGB4Q9UN71 923 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 SMIM31A0A1B0GVY4 71 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 E5RI56 91 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PSIP1O75475 530 aaKnown RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 GMFBP60983 142 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 FBXO42Q6P3S6 717 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 PPP2R3BQ9Y5P8 575 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 CDH16O75309 829 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 SNX4O95219 450 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ECDO95905 644 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 FESP07332 822 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
COL12A1-201ENST00000322507 RFFLQ8WZ73 363 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF408Q9H9D4 720 aa10.14□□□□□ -0.79
COL12A1-201ENST00000322507 E4F1Q66K89 784 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-201ENST00000322507 IL17REQ8NFR9 667 aa10.13□□□□□ -0.79
COL12A1-201ENST00000322507 LRRC20Q8TCA0 184 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms