RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PARVAQ9NVD7 372 aa18.46■□□□□ 0.54
COL9A1-201ENST00000320755 NAMPTP43490 491 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 TMED2Q15363 201 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 CYB5D1Q6P9G0 228 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 CATSPERGQ6ZRH7 1159 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 PRPF31Q8WWY3 499 aaKnown RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 CGRRF1Q99675 332 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 C10orf88Q9H8K7 445 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 SAYSD1Q9NPB0 183 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 SPDYE16A6NNV3 312 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 PSTPIP1O43586 416 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 DYNLT1P63172 113 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 TFAMQ00059 246 aaKnown RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 CAPSQ13938 189 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 ZNF568Q3ZCX4 644 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 TNFAIP8L3Q5GJ75 292 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 PLEKHA7Q6IQ23 1121 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 HIBCHQ6NVY1 386 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 CEP57Q86XR8 500 aa18.45■□□□□ 0.54
COL9A1-201ENST00000320755 THOC1Q96FV9 657 aaKnown RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 NSRP1Q9H0G5 558 aaKnown RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 SAE1Q9UBE0 346 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 MAFBQ9Y5Q3 323 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-201ENST00000320755 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
COL9A1-201ENST00000320755 POC1B-GALNT4F8VUJ3 575 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 GOLGA8SH3BPF8 625 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 GOLGA8MH3BSY2 632 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 SYDE1Q6ZW31 735 aaPredicted RBP18.44■□□□□ 0.54
COL9A1-201ENST00000320755 LRRC71Q8N4P6 559 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 KDM4CQ9H3R0 1056 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 SCINQ9Y6U3 715 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 CNTNAP2Q9UHC6 1331 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 LRRD1A4D1F6 860 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 STX2P32856 288 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 ARL2P36404 184 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 CETN2P41208 172 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 TRPM8Q7Z2W7 1104 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 TRIM50Q86XT4 487 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 KATNAL2Q8IYT4 538 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 TMEM130Q8N3G9 435 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 STYXL1Q9Y6J8 313 aa18.44■□□□□ 0.54
COL9A1-201ENST00000320755 SPAG7O75391 227 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 LDHAP00338 332 aaKnown RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 MAGEA4P43358 317 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 ARSEP51690 589 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 GPS1Q13098 491 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 PLCB4Q15147 1175 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 TMEM132AQ24JP5 1023 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 FAM182AQ5T1J6 154 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 TRIM72Q6ZMU5 477 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 TBC1D1Q86TI0 1168 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 PNMA8AQ86V59 439 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 PHF13Q86YI8 300 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 THNSL1Q8IYQ7 743 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 EXD1Q8NHP7 514 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 GINM1Q9NU53 330 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 HOXC10Q9NYD6 342 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 NXF1Q9UBU9 619 aaKnown RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 PIAS1O75925 651 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 UBA1P22314 1058 aaKnown RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 TBXAS1P24557 533 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 PTP4A2Q12974 167 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 ORC1Q13415 861 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 FASTKD3Q14CZ7 662 aaKnown RBP18.43■□□□□ 0.54
COL9A1-201ENST00000320755 GPAT2Q6NUI2 795 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 TCP11Q8WWU5 503 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 IP6K2Q9UHH9 426 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 RASA4BC9J798 803 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 RASA4O43374 803 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 SNX3O60493 162 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 ATP5DP30049 168 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 STAT5BP51692 787 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 OGDHQ02218 1023 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 SMTNL2Q2TAL5 461 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 PARP9Q8IXQ6 854 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 ZBTB10Q96DT7 871 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 CCDC77Q9BR77 488 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 ADAMTS5Q9UNA0 930 aa18.43■□□□□ 0.54
COL9A1-201ENST00000320755 GJB1P08034 283 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 CD19P15391 556 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 OAZ1P54368 228 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 TGFB2P61812 414 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 CAV1Q03135 178 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
COL9A1-201ENST00000320755 TRPC3Q13507 836 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 LACTB2Q53H82 288 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-201ENST00000320755 FAM47EQ6ZV65 393 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 PCYT2Q99447 389 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 TMEM121Q9BTD3 319 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 NEU2Q9Y3R4 380 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 MMP8P22894 467 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 LY6KQ17RY6 165 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 KCNT1Q5JUK3 1230 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 NCAPG2Q86XI2 1143 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 RNF149Q8NC42 400 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 TGS1Q96RS0 853 aaKnown RBP18.42■□□□□ 0.54
COL9A1-201ENST00000320755 ZWILCHQ9H900 591 aa18.42■□□□□ 0.54
COL9A1-201ENST00000320755 VPS37BQ9H9H4 285 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms