RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GGPS1O95749 300 aa16.5■□□□□ 0.23
SHROOM1-201ENST00000319854 SCARA5Q6ZMJ2 495 aa16.5■□□□□ 0.23
SHROOM1-201ENST00000319854 USP37Q86T82 979 aa16.5■□□□□ 0.23
SHROOM1-201ENST00000319854 SPIRE2Q8WWL2 714 aa16.5■□□□□ 0.23
SHROOM1-201ENST00000319854 PIDD1Q9HB75 910 aa16.5■□□□□ 0.23
SHROOM1-201ENST00000319854 AGTP01019 485 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 NUGGCQ68CJ6 796 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 NTPCRQ9BSD7 190 aaKnown RBP16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 ARHGAP28Q9P2N2 729 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 MAFGO15525 162 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
SHROOM1-201ENST00000319854 SYNGAP1Q96PV0 1343 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 FDX1P10109 184 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 PECAM1P16284 738 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 TCF7P36402 384 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 RPL21P46778 160 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 SPDYCQ5MJ68 293 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 ANO7Q6IWH7 933 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 NSRP1Q9H0G5 558 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 MYH9P35579 1960 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 EXTL3O43909 919 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 GH1P01241 217 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 RAB27AP51159 221 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 IGBP1P78318 339 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 TNFAIP8L3Q5GJ75 292 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 DDX1Q92499 740 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 DKC1O60832 514 aaKnown RBP eCLIP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 NSFP46459 744 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 STAT5BP51692 787 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 MPP2Q14168 576 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 CGB2Q6NT52 195 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 XRRA1Q6P2D8 792 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 PRUNE1Q86TP1 453 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 GDAP1Q8TB36 358 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 DYDC1Q8WWB3 177 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 COPS5Q92905 334 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 ACSF2Q96CM8 615 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 PDLIM7Q9NR12 457 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 CSADQ9Y600 493 aa16.48■□□□□ 0.23
SHROOM1-201ENST00000319854 PEX5P50542 639 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 CCNG1P51959 295 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 LONRF1Q17RB8 773 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 HSDL1Q3SXM5 330 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 THNSL1Q8IYQ7 743 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 RDM1Q8NG50 284 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 BRCA2P51587 3418 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 LIN7AO14910 233 aaPredicted RBP16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 THAP12O43422 761 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 VNN1O95497 513 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 GZMAP12544 262 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 GJC2Q5T442 439 aaPredicted RBP16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 ANKRD42Q8N9B4 389 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
SHROOM1-201ENST00000319854 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 RIPK2O43353 540 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 SUN1O94901 812 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PDHA1P08559 390 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 GNAZP19086 355 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PTGIRP43119 386 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 RWDD2BP57060 319 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 ORC1Q13415 861 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 CAPSQ13938 189 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 C11orf63Q6NUN7 778 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PSPC1Q8WXF1 523 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PCYT2Q99447 389 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 PORCNQ9H237 461 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 TTC7AQ9ULT0 858 aaPredicted RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 COQ4Q9Y3A0 265 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 NUB1Q9Y5A7 615 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 GSTTP1A0A1W2PQM5 241 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 TMEM120BA0PK00 339 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 MIF4GDA9UHW6 222 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 ARIH2O95376 493 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 FESP07332 822 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 GM2AP17900 193 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 MKRN3Q13064 507 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 KAZNQ674X7 775 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 VSTM1Q6UX27 236 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 SLC13A5Q86YT5 568 aaPredicted RBP16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 RNF149Q8NC42 400 aa16.46■□□□□ 0.23
SHROOM1-201ENST00000319854 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms