RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 CTNNB1P35222 781 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 POLR2FP61218 127 aaKnown RBP24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 SOWAHAQ2M3V2 549 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 FUT10Q6P4F1 479 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 GPIHBP1Q8IV16 184 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 ZNF830Q96NB3 372 aaPredicted RBP24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 CERS4Q9HA82 394 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 NLRC4Q9NPP4 1024 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 AAASQ9NRG9 546 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 SPG21Q9NZD8 308 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 DNAJC12Q9UKB3 198 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 L1RE1Q9UN81 338 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 PCDHB12Q9Y5F1 795 aa24.02■■□□□ 1.44
CCDC85B-201ENST00000312579 RNF225M0QZC1 329 aaPredicted RBP24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 TAP1Q03518 808 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 CUL2Q13617 745 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 ARHGAP44Q17R89 818 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 WSCD1Q658N2 575 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 KLHL23Q8NBE8 558 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 SUSD3Q96L08 255 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 MRPL45Q9BRJ2 306 aaKnown RBP24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 MSRAQ9UJ68 235 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 CHD9Q3L8U1 2897 aa24.01■■□□□ 1.43
CCDC85B-201ENST00000312579 HCRTO43612 131 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 PNMA6AP0CW24 399 aaPredicted RBP24■■□□□ 1.43
CCDC85B-201ENST00000312579 CD58P19256 250 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 TRIM21P19474 475 aaKnown RBP24■■□□□ 1.43
CCDC85B-201ENST00000312579 TKTP29401 623 aaKnown RBP24■■□□□ 1.43
CCDC85B-201ENST00000312579 BMPR1AP36894 532 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 TBX2Q13207 712 aaPredicted RBP24■■□□□ 1.43
CCDC85B-201ENST00000312579 FAM171A1Q5VUB5 890 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 PDCL2Q8N4E4 241 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 CPLX3Q8WVH0 158 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 NAA15Q9BXJ9 866 aaKnown RBP24■■□□□ 1.43
CCDC85B-201ENST00000312579 BCO2Q9BYV7 579 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 M0QZQ0 153 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 FGF18O76093 207 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 RAPGEF1Q13905 1077 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 ZSCAN30Q86W11 494 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 PPFIBP1Q86W92 1011 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 CEP57Q86XR8 500 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 TMEM169Q96HH4 297 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 TTYH3Q9C0H2 523 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 KCNF1Q9H3M0 494 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 ZKSCAN5Q9Y2L8 839 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 NME7Q9Y5B8 376 aa24■■□□□ 1.43
CCDC85B-201ENST00000312579 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC85B-201ENST00000312579 NLRC5Q86WI3 1866 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 SF3B1O75533 1304 aaKnown RBP eCLIP23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 HUS1O60921 280 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 P4HA1P13674 534 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 GOLGA8FQ08AF8 430 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 GOLGA8DPQ0D2H9 430 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 ARID5BQ14865 1188 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 RAB30Q15771 203 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 LIMS2Q7Z4I7 341 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 OSTM1Q86WC4 334 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 APPL2Q8NEU8 664 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 KBTBD7Q8WVZ9 684 aa23.99■■□□□ 1.43
CCDC85B-201ENST00000312579 CSPG5O95196 566 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 EFEMP2O95967 443 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 GYPCP04921 128 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 TPM1P09493 284 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 DNAJB2P25686 324 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 GCNT1Q02742 428 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 ORC1Q13415 861 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 LRRC8AQ8IWT6 810 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 ADGRF2Q8IZF7 708 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 TOP6BLQ8N6T0 577 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 GPR88Q9GZN0 384 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 ALG13Q9NP73 1137 aaKnown RBP23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 HMGXB4Q9UGU5 601 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 PCDHB8Q9UN66 801 aa23.98■■□□□ 1.43
CCDC85B-201ENST00000312579 CHD7Q9P2D1 2997 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 TRAPPC3O43617 180 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 ODC1P11926 461 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 ACO1P21399 889 aaKnown RBP23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 TBXAS1P24557 533 aaPredicted RBP23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 PPM1AP35813 382 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 MFAP3P55082 362 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 TRIM14Q14142 442 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 DRAP1Q14919 205 aaPredicted RBP23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 PPP2R2DQ66LE6 453 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 UBR7Q8N806 425 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 TGS1Q96RS0 853 aaKnown RBP23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 CISHQ9NSE2 258 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 VWA8A3KMH1 1905 aa23.97■■□□□ 1.43
CCDC85B-201ENST00000312579 CALCAP01258 141 aa23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 FXR1P51114 621 aaKnown RBP eCLIP23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 ERVK-21P61565 698 aa23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 RTP2Q5QGT7 225 aa23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 CACNA2D4Q7Z3S7 1137 aa23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 RNF168Q8IYW5 571 aaPredicted RBP23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 BAP1Q92560 729 aa23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 CEP72Q9P209 647 aa23.96■■□□□ 1.43
CCDC85B-201ENST00000312579 FOXN3O00409 490 aaPredicted RBP23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 PDGFRBP09619 1106 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 FGFR3P22607 806 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 LMO2P25791 158 aa23.95■■□□□ 1.43
CCDC85B-201ENST00000312579 MSNP26038 577 aaKnown RBP23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms