RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LIN9Q5TKA1 542 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 TWF2Q6IBS0 349 aaKnown RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 MON1BQ7L1V2 547 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 PASD1Q8IV76 773 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 TMEM130Q8N3G9 435 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 PDCL2Q8N4E4 241 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 APOL6Q9BWW8 343 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 SENP6Q9GZR1 1112 aaPredicted RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 SDCBP2Q9H190 292 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 CXCL16Q9H2A7 254 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ARGLU1Q9NWB6 273 aaPredicted RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ADAM22Q9P0K1 906 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ST3GAL5Q9UNP4 418 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 IPPQ9Y573 584 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 SMIM28A0A1B0GU29 152 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 GPR182O15218 404 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ATMINO43313 823 aaPredicted RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 CILPO75339 1184 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 CD4P01730 458 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 KCNE1P15382 129 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 BRD2P25440 801 aaKnown RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 RAP1GAPP47736 663 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ACLYP53396 1101 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 FBXO38Q6PIJ6 1188 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 MMGT1Q8N4V1 131 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 LRRC52Q8N7C0 313 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 TMEM35BQ8NCS4 154 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 MSANTD4Q8NCY6 345 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 SMG8Q8ND04 991 aaKnown RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 WNT8BQ93098 351 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 MS4A14Q96JA4 679 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 SMYD3Q9H7B4 428 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 CHORDC1Q9UHD1 332 aaPredicted RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 MOXD2PA6NHM9 499 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 TLR3O15455 904 aaKnown RBP17.81■□□□□ 0.44
CLCF1-201ENST00000312438 RRM1P23921 792 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 RAD23BP54727 409 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 MGAT3Q09327 533 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
CLCF1-201ENST00000312438 MESDQ14696 234 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 WHAMMQ8TF30 809 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 TFAP2BQ92481 460 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 TMEM176AQ96HP8 235 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 ZSWIM1Q9BR11 485 aa17.81■□□□□ 0.44
CLCF1-201ENST00000312438 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
CLCF1-201ENST00000312438 HMX1Q9NP08 348 aaPredicted RBP17.81■□□□□ 0.44
CLCF1-201ENST00000312438 MIF4GDA9UHW6 222 aaKnown RBP17.8■□□□□ 0.44
CLCF1-201ENST00000312438 RHOXF2BP0C7M4 288 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 ATF7P17544 494 aaPredicted RBP17.8■□□□□ 0.44
CLCF1-201ENST00000312438 THPOP40225 353 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 PTK7Q13308 1070 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 PTPROQ16827 1216 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 ACTRT1Q8TDG2 376 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 ZNF296Q8WUU4 475 aaPredicted RBP17.8■□□□□ 0.44
CLCF1-201ENST00000312438 C18orf25Q96B23 403 aaPredicted RBP17.8■□□□□ 0.44
CLCF1-201ENST00000312438 RHOXF2Q9BQY4 288 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 LHX5Q9H2C1 402 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 MRPL47Q9HD33 250 aaKnown RBP17.8■□□□□ 0.44
CLCF1-201ENST00000312438 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 KLK14Q9P0G3 267 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 BARX2Q9UMQ3 279 aaPredicted RBP17.8■□□□□ 0.44
CLCF1-201ENST00000312438 CEP83Q9Y592 693 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 CASP8AP2Q9UKL3 1982 aa17.8■□□□□ 0.44
CLCF1-201ENST00000312438 DDX3YO15523 660 aaKnown RBP17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CEP104O60308 925 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 INHAP05111 366 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CTSHP09668 335 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CD19P15391 556 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CYP3A5P20815 502 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 MMP8P22894 467 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CDH5P33151 784 aaPredicted RBP17.79■□□□□ 0.44
CLCF1-201ENST00000312438 INCA1Q0VD86 236 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CCDC70Q6NSX1 233 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 SLC4A11Q8NBS3 891 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 GLT1D1Q96MS3 346 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 C11orf70Q9BRQ4 267 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 WNT8AQ9H1J5 351 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 KIAA1257Q9ULG3 409 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 NOD1Q9Y239 953 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 SCN10AQ9Y5Y9 1956 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 CALB1P05937 261 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 COMTP21964 271 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 YY1P25490 414 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 C2orf54Q08AI8 447 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 PTP4A2Q12974 167 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 C9orf57Q5W0N0 161 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 LHX8Q68G74 356 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 RASGEF1CQ8N431 466 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 UBL4BQ8N7F7 174 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 SMARCAL1Q9NZC9 954 aa17.79■□□□□ 0.44
CLCF1-201ENST00000312438 EHD2Q9NZN4 543 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms