RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 TAF6P49848 677 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 BTG3Q14201 252 aaPredicted RBP12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 PDXDC1Q6P996 788 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 UBR7Q8N806 425 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 FAM193BQ96PV7 902 aaPredicted RBP12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 TWNKQ96RR1 684 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 GDF15Q99988 308 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 LPIN3Q9BQK8 851 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 VRTNQ9H8Y1 702 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 KANSL3Q9P2N6 904 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 L1RE1Q9UN81 338 aa12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 LUC7L2Q9Y383 392 aaKnown RBP12.38□□□□□ -0.43
ZC3HC1-201ENST00000311873 TSC2P49815 1807 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 A0A1W2PQJ5 194 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 GFPT2O94808 682 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 GALTP07902 379 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 SKILP12757 684 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 ATICP31939 592 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 USP8P40818 1118 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 HTRA4P83105 476 aaPredicted RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 GCNT1Q02742 428 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 WDR59Q6PJI9 974 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 MTERF4Q7Z6M4 381 aaKnown RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 KBTBD7Q8WVZ9 684 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 SHC3Q92529 594 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 RNPC3Q96LT9 517 aaKnown RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 STK33Q9BYT3 514 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 CISHQ9NSE2 258 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 VWA8A3KMH1 1905 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 CYP26A1O43174 497 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 NRDCO43847 1150 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 STAU1O95793 577 aaKnown RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 KRT5P13647 590 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 SSTR3P32745 418 aaPredicted RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 RPL9P32969 192 aaKnown RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 TNNC1P63316 161 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 ZBED6P86452 979 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 WSCD1Q658N2 575 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 PDCL2Q8N4E4 241 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 CCDC150Q8NCX0 1101 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 SENP8Q96LD8 212 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 ZNF560Q96MR9 790 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 DNAJC7Q99615 494 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 VN1R3Q9BXE9 311 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 GPR62Q9BZJ7 368 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 UBE2OQ9C0C9 1292 aaKnown RBP12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 FBXL5Q9UKA1 691 aa12.37□□□□□ -0.43
ZC3HC1-201ENST00000311873 CYB561D2O14569 222 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 LMO2P25791 158 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 MFAP3P55082 362 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 TRIM14Q14142 442 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 SV2CQ496J9 727 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 DCLRE1AQ6PJP8 1040 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 TMEM270Q6UE05 265 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 FAM43BQ6ZT52 329 aaPredicted RBP12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 TAS1R1Q7RTX1 841 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 SLC47A2Q86VL8 602 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 TMEM139Q8IV31 216 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 C17orf53Q8N3J3 647 aaPredicted RBP12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 TAF4BQ92750 862 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 CHP1Q99653 195 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 DPEP3Q9H4B8 488 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 GDAP2Q9NXN4 497 aa12.36□□□□□ -0.43
ZC3HC1-201ENST00000311873 TLL1O43897 1013 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 SOX5P35711 763 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 PBX2P40425 430 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 PNPLA4P41247 253 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 SPOUT1Q5T280 376 aaKnown RBP12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 HGSNATQ68CP4 663 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 CMTR2Q8IYT2 770 aaKnown RBP12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 UROC1Q96N76 676 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 FAN1Q9Y2M0 1017 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 ALDH2P05091 517 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 CFHP08603 1231 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 GTF2F1P35269 517 aaKnown RBP eCLIP12.35□□□□□ -0.433e-9■■■■□ 20.1
ZC3HC1-201ENST00000311873 NDST1P52848 882 aa12.35□□□□□ -0.43
ZC3HC1-201ENST00000311873 MTF1Q14872 753 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms