RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 IGSF9Q9P2J2 1179 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 CDH7Q9ULB5 785 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 DUSP12Q9UNI6 340 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 HPSEQ9Y251 543 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 UBE4BO95155 1302 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 PTPRJQ12913 1337 aa17.62■□□□□ 0.41
LSM1-201ENST00000311351 WDFY4Q6ZS81 3184 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 OR6C75A6NL08 312 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 TGFB1I1O43294 461 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 KLRC4O43908 158 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 ITGB3P05106 788 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 RHOP08100 348 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 CDR1P51861 262 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 VCPP55072 806 aaKnown RBP17.61■□□□□ 0.41
LSM1-201ENST00000311351 TWF1Q12792 350 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 HTR4Q13639 388 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 BECN1Q14457 450 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 NT5DC4Q86YG4 428 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 SUGP1Q8IWZ8 645 aaKnown RBP17.61■□□□□ 0.41
LSM1-201ENST00000311351 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 OR10T2Q8NGX3 314 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 FGF13Q92913 245 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 MTMR12Q9C0I1 747 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 CRISPLD1Q9H336 500 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 AGPAT3Q9NRZ7 376 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 YIPF1Q9Y548 306 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 NUMBLQ9Y6R0 609 aa17.61■□□□□ 0.41
LSM1-201ENST00000311351 PVALEFA0A1B0GWK0 134 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 NRG2O14511 850 aaPredicted RBP17.6■□□□□ 0.41
LSM1-201ENST00000311351 CYB561D2O14569 222 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 KIAA0391O15091 583 aaKnown RBP17.6■□□□□ 0.41
LSM1-201ENST00000311351 CLIC2O15247 247 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 CYP11A1P05108 521 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 CYP2J2P51589 502 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 NDUFA8P51970 172 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 SV2CQ496J9 727 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 TTC9BQ8N6N2 239 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 BORCS6Q96GS4 357 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 ZNF560Q96MR9 790 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 RTP3Q9BQQ7 232 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 CORO1BQ9BR76 489 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 GOLPH3LQ9H4A5 285 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 AGAP1Q9UPQ3 857 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 MRPS23Q9Y3D9 190 aaKnown RBP17.6■□□□□ 0.41
LSM1-201ENST00000311351 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
LSM1-201ENST00000311351 MTMR11A4FU01 709 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 ANHXE9PGG2 379 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 TMEM191BP0C7N4 346 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 CEBPBP17676 345 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 PAX3P23760 479 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 SYKP43405 635 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 GPR17Q13304 367 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 MYBPC2Q14324 1141 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 WSCD1Q658N2 575 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 PARM1Q6UWI2 310 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 SLC44A3Q8N4M1 653 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 FSIP1Q8NA03 581 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 KIAA0895Q8NCT3 520 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 OR5B17Q8NGF7 314 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 CXorf38Q8TB03 319 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 FGF14Q92915 247 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 TCEAL4Q96EI5 215 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 OXCT2Q9BYC2 517 aaPredicted RBP17.59■□□□□ 0.41
LSM1-201ENST00000311351 SCAND2PQ9GZW5 306 aaPredicted RBP17.59■□□□□ 0.41
LSM1-201ENST00000311351 EXOC1Q9NV70 894 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 CEP72Q9P209 647 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 SIX4Q9UIU6 781 aa17.59■□□□□ 0.41
LSM1-201ENST00000311351 FAM237AA0A1B0GTK4 181 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 ZNF233A6NK53 670 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 KPNA7A9QM74 516 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 SOAT2O75908 522 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 CFHP08603 1231 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 KRT19P08727 400 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 PTPN2P17706 415 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 CCR2P41597 374 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 BFSP1Q12934 665 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 DUSP4Q13115 394 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 KMT5BQ4FZB7 885 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 CSGALNACT2Q8N6G5 542 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 RDH13Q8NBN7 331 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 ATAD1Q8NBU5 361 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 CACTINQ8WUQ7 758 aaKnown RBP17.58■□□□□ 0.4
LSM1-201ENST00000311351 RPP25Q9BUL9 199 aaKnown RBP17.58■□□□□ 0.4
LSM1-201ENST00000311351 ITGA11Q9UKX5 1188 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 DSEQ9UL01 958 aa17.58■□□□□ 0.4
LSM1-201ENST00000311351 ZFP37Q9Y6Q3 630 aaPredicted RBP17.58■□□□□ 0.4
LSM1-201ENST00000311351 PNPLA4P41247 253 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 STK4Q13043 487 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 SNRNP35Q16560 246 aaKnown RBP17.57■□□□□ 0.4
LSM1-201ENST00000311351 SLC39A12Q504Y0 691 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 PRSS36Q5K4E3 855 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 IER5LQ5T953 404 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 CENPPQ6IPU0 288 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 HS2ST1Q7LGA3 356 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 METTL23Q86XA0 190 aa17.57■□□□□ 0.4
LSM1-201ENST00000311351 ELMOD1Q8N336 334 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms