RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 XKR4Q5GH76 650 aa25.16■■□□□ 1.62
SNCB-201ENST00000310112 CCSAPQ6IQ19 270 aaPredicted RBP25.16■■□□□ 1.62
SNCB-201ENST00000310112 TMCO3Q6UWJ1 677 aa25.16■■□□□ 1.62
SNCB-201ENST00000310112 TMEM40Q8WWA1 233 aa25.16■■□□□ 1.62
SNCB-201ENST00000310112 LHX5Q9H2C1 402 aa25.16■■□□□ 1.62
SNCB-201ENST00000310112 PGRMC1O00264 195 aaKnown RBP25.15■■□□□ 1.62
SNCB-201ENST00000310112 ASGR1P07306 291 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 KCNE1P15382 129 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 ATF7P17544 494 aaPredicted RBP25.15■■□□□ 1.62
SNCB-201ENST00000310112 SLC1A1P43005 524 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 CLCN6P51797 869 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 TRIM32Q13049 653 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 SCARA3Q6AZY7 606 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 HACE1Q8IYU2 909 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 USP38Q8NB14 1042 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 CPA5Q8WXQ8 436 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.15■■□□□ 1.62
SNCB-201ENST00000310112 ADAM22Q9P0K1 906 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 POLIQ9UNA4 740 aa25.15■■□□□ 1.62
SNCB-201ENST00000310112 CCDC188H7C350 402 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 TLR3O15455 904 aaKnown RBP25.14■■□□□ 1.61
SNCB-201ENST00000310112 DDX3YO15523 660 aaKnown RBP25.14■■□□□ 1.61
SNCB-201ENST00000310112 RECQL4O94761 1208 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 RHOXF2BP0C7M4 288 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 CYP3A5P20815 502 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 CTNNA2P26232 953 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 CCND3P30281 292 aaPredicted RBP25.14■■□□□ 1.61
SNCB-201ENST00000310112 INCA1Q0VD86 236 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 KCNA10Q16322 511 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 UBXN11Q5T124 520 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 GDF6Q6KF10 455 aaPredicted RBP25.14■■□□□ 1.61
SNCB-201ENST00000310112 SCARA5Q6ZMJ2 495 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 RNF180Q86T96 592 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 RHOXF2Q9BQY4 288 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 GOLPH3Q9H4A6 298 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 DDX20Q9UHI6 824 aaKnown RBP25.14■■□□□ 1.61
SNCB-201ENST00000310112 CDY2AQ9Y6F7 541 aa25.14■■□□□ 1.61
SNCB-201ENST00000310112 CCDC66A2RUB6 948 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 CEP104O60308 925 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 CILPO75339 1184 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 MMP8P22894 467 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 TAP1Q03518 808 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 C2orf54Q08AI8 447 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 MESDQ14696 234 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 STILQ15468 1287 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 PPP2R5EQ16537 467 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 FAM228AQ86W67 206 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 PPP1R13LQ8WUF5 828 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 DNAI2Q9GZS0 605 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 ARFGAP3Q9NP61 516 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 TMEM59LQ9UK28 342 aa25.13■■□□□ 1.61
SNCB-201ENST00000310112 BARX2Q9UMQ3 279 aaPredicted RBP25.13■■□□□ 1.61
SNCB-201ENST00000310112 TRPA1O75762 1119 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 CALCAP01258 141 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 ELNP15502 786 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 PNPLA4P41247 253 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 RAD23BP54727 409 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 FAM47CQ5HY64 1035 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 PLEKHA7Q6IQ23 1121 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 CD99L2Q8TCZ2 262 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 RAET1EQ8TD07 263 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 TMEM176AQ96HP8 235 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 MS4A14Q96JA4 679 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 TSEN34Q9BSV6 310 aaKnown RBP25.12■■□□□ 1.61
SNCB-201ENST00000310112 NXF3Q9H4D5 531 aaKnown RBP25.12■■□□□ 1.61
SNCB-201ENST00000310112 PARVAQ9NVD7 372 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 STRIP2Q9ULQ0 834 aa25.12■■□□□ 1.61
SNCB-201ENST00000310112 PDCD11Q14690 1871 aaKnown RBP25.11■■□□□ 1.61
SNCB-201ENST00000310112 CAND2O75155 1236 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 RPS6KA5O75582 802 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 VDRP11473 427 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 HSPA6P17066 643 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 COMTP21964 271 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 PTP4A2Q12974 167 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 MAP9Q49MG5 647 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 ZNF560Q96MR9 790 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 ZSWIM1Q9BR11 485 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 PLVAPQ9BX97 442 aa25.11■■□□□ 1.61
SNCB-201ENST00000310112 SENP6Q9GZR1 1112 aaPredicted RBP25.11■■□□□ 1.61
SNCB-201ENST00000310112 NOC2LQ9Y3T9 749 aaKnown RBP25.11■■□□□ 1.61
SNCB-201ENST00000310112 MYO1FO00160 1098 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 GPR182O15218 404 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 ATMINO43313 823 aaPredicted RBP25.1■■□□□ 1.61
SNCB-201ENST00000310112 RRM1P23921 792 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 BRD2P25440 801 aaKnown RBP25.1■■□□□ 1.61
SNCB-201ENST00000310112 DNA2P51530 1060 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 MGAT3Q09327 533 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 PTK7Q13308 1070 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 CD101Q93033 1021 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 PNKPQ96T60 521 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 SDCBP2Q9H190 292 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 EPC1Q9H2F5 836 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 SMYD3Q9H7B4 428 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 ANAPC7Q9UJX3 599 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 IPPQ9Y573 584 aa25.1■■□□□ 1.61
SNCB-201ENST00000310112 MOXD2PA6NHM9 499 aa25.09■■□□□ 1.61
SNCB-201ENST00000310112 SPOPO43791 374 aa25.09■■□□□ 1.61
SNCB-201ENST00000310112 MAN1A1P33908 653 aa25.09■■□□□ 1.61
SNCB-201ENST00000310112 CTNNA1P35221 906 aaKnown RBP25.09■■□□□ 1.61
SNCB-201ENST00000310112 CAP1Q01518 475 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms