RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 C1orf220Q5T0J3 134 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 RASIP1Q5U651 963 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 CLNKQ7Z7G1 428 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 GLIS1Q8NBF1 620 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 CFAP61Q8NHU2 1237 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 PIDD1Q9HB75 910 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 MRPL47Q9HD33 250 aaKnown RBP11.77□□□□□ -0.53
PTPN7-201ENST00000309017 MRPL11Q9Y3B7 192 aaKnown RBP11.77□□□□□ -0.53
PTPN7-201ENST00000309017 ZHX2Q9Y6X8 837 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 ABCA3Q99758 1704 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 DENND3A2RUS2 1198 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 ZBED4O75132 1171 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 UBTFL6P0CB48 400 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-201ENST00000309017 T-ENOLP0DO92 83 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
PTPN7-201ENST00000309017 ZNF568Q3ZCX4 644 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 SV2AQ7L0J3 742 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 FGD4Q96M96 766 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 FAM161BQ96MY7 647 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 CYTH2Q99418 400 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 FAM213AQ9BRX8 229 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 TSSK1BQ9BXA7 367 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 GINM1Q9NU53 330 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 LRCH1Q9Y2L9 728 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 PCDHB4Q9Y5E5 795 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 DNALI1O14645 258 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 RGL2O15211 777 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 FESP07332 822 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 CNGA1P29973 690 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 ECE1P42892 770 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 DMP1Q13316 513 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 HIF1AQ16665 826 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 PLA2G4FQ68DD2 849 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 C4orf50Q6ZRC1 276 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 RFWD2Q8NHY2 731 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 HOMER2Q9NSB8 354 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 GRID1Q9ULK0 1009 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 TJP3O95049 919 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 MT-ND3P03897 115 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SSTR1P30872 391 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SP4Q02446 784 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 THOC5Q13769 683 aaKnown RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 TMEM270Q6UE05 265 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 ARHGAP24Q8N264 748 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 TCP10LQ8TDR4 215 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 GMCL1Q96IK5 515 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 NSL1Q96IY1 281 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 MAK16Q9BXY0 300 aaKnown RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 KMT5AQ9NQR1 393 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 FBXO6Q9NRD1 293 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SUGT1Q9Y2Z0 365 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 PRPF4O43172 522 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 ABHD2P08910 425 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SERPINB3P29508 390 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 QARSP47897 775 aaKnown RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 SERPINB4P48594 390 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 RARRES1P49788 294 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 AOC3Q16853 763 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 BTBD10Q9BSF8 475 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 TMEM121Q9BTD3 319 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 CADM1Q9BY67 442 aaKnown RBP11.76□□□□□ -0.53
PTPN7-201ENST00000309017 MANSC1Q9H8J5 431 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 ARL8BQ9NVJ2 186 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 ETAA1Q9NY74 926 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
PTPN7-201ENST00000309017 C2CD2LO14523 706 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 CIB2O75838 187 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 FDX1P10109 184 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
PTPN7-201ENST00000309017 YWHABP31946 246 aaKnown RBP11.75□□□□□ -0.53
PTPN7-201ENST00000309017 PGM1P36871 562 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 BPIFB4P59827 614 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 TFDP1Q14186 410 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 EFTUD2Q15029 972 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN7-201ENST00000309017 MAPK6Q16659 721 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 HHIPL2Q6UWX4 724 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 LRRC74BQ6ZQY2 392 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 LRRC6Q86X45 466 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 SIAH1Q8IUQ4 282 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 CEP120Q8N960 986 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 CSRNP1Q96S65 589 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 PCDHB2Q9Y5E7 798 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 PSTPIP1O43586 416 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 HNRNPCL1O60812 293 aaKnown RBP11.75□□□□□ -0.53
PTPN7-201ENST00000309017 ZCCHC18P0CG32 403 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 CACNA2D1P54289 1103 aa11.75□□□□□ -0.53
PTPN7-201ENST00000309017 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms