RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CORO1BQ9BR76 489 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 SPTLC1O15269 473 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 DYNC1LI2O43237 492 aaPredicted RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 C6orf222P0C671 652 aaPredicted RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 DR1Q01658 176 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 NXNQ6DKJ4 435 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 PASD1Q8IV76 773 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 AFAP1L2Q8N4X5 818 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 KCND1Q9NSA2 647 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 SUN2Q9UH99 717 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ZNF609O15014 1411 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 STK36Q9NRP7 1315 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ANKRD33BA6NCL7 494 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 ADCY8P40145 1251 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 TWF2Q6IBS0 349 aaKnown RBP16.02■□□□□ 0.16
LEMD3-201ENST00000308330 MMGT1Q8N4V1 131 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 PSPC1Q8WXF1 523 aaKnown RBP16.02■□□□□ 0.16
LEMD3-201ENST00000308330 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 REREQ9P2R6 1566 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.02■□□□□ 0.16
LEMD3-201ENST00000308330 ZNF185O15231 689 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 GRK2P25098 689 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 SMARCA1P28370 1054 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
LEMD3-201ENST00000308330 SCYL2Q6P3W7 929 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 SDCCAG3Q96C92 435 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 ATG4CQ96DT6 458 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 AP1M1Q9BXS5 423 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 RRAGCQ9HB90 399 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 SNX5Q9Y5X3 404 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 DEPDC5O75140 1603 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 ITSN1Q15811 1721 aa16.02■□□□□ 0.16
LEMD3-201ENST00000308330 ZBTB24O43167 697 aaPredicted RBP16.02■□□□□ 0.15
LEMD3-201ENST00000308330 TDP2O95551 362 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 ACTN1P12814 892 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 CHKAP35790 457 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 MAPK6Q16659 721 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 EPM2AIP1Q7L775 607 aaPredicted RBP16.02■□□□□ 0.15
LEMD3-201ENST00000308330 GPRC5AQ8NFJ5 357 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 HPS1Q92902 700 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 P2RX5Q93086 422 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 CNOT6LQ96LI5 555 aaKnown RBP16.02■□□□□ 0.15
LEMD3-201ENST00000308330 TUBGCP2Q9BSJ2 902 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 RIC8AQ9NPQ8 531 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 ZNF302Q9NR11 478 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 CTNNAL1Q9UBT7 734 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 MTRF1O75570 445 aaKnown RBP16.02■□□□□ 0.15
LEMD3-201ENST00000308330 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 RMDN1Q96DB5 314 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 RXFP1Q9HBX9 757 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 PPLO60437 1756 aa16.02■□□□□ 0.15
LEMD3-201ENST00000308330 FAM25AB3EWG3 89 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 FAM25CB3EWG5 89 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 FAM25GB3EWG6 89 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 PLIN5Q00G26 463 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 DNAL1Q4LDG9 190 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 PPP1R2P3Q6NXS1 205 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 ERO1BQ86YB8 467 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 SRRM1Q8IYB3 904 aaKnown RBP16.01■□□□□ 0.15
LEMD3-201ENST00000308330 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
LEMD3-201ENST00000308330 TMBIM4Q9HC24 238 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 PCDHA13Q9Y5I0 950 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 PRKACBP22694 351 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 KCNJ2P63252 427 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 PTK2Q05397 1052 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 ITGADQ13349 1161 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 DCUN1D5Q9BTE7 237 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 SHOX2O60902 331 aaPredicted RBP16.01■□□□□ 0.15
LEMD3-201ENST00000308330 TTC30AQ86WT1 665 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 SIX6OS1Q8N1H7 587 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 FAM149B1Q96BN6 582 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 CCDC124Q96CT7 223 aaKnown RBP16.01■□□□□ 0.15
LEMD3-201ENST00000308330 SNX12Q9UMY4 172 aa16.01■□□□□ 0.15
LEMD3-201ENST00000308330 CAPN15O75808 1086 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 P4HBP07237 508 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 JAK1P23458 1154 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 SREBF2Q12772 1141 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 IYDQ6PHW0 289 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 METTL23Q86XA0 190 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 ACER1Q8TDN7 264 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 PAWRQ96IZ0 340 aaKnown RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 SFNP31947 248 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 CAP2P40123 477 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 CCNFP41002 786 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 LPIN1Q14693 890 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 CDCA2Q69YH5 1023 aaPredicted RBP16■□□□□ 0.15
LEMD3-201ENST00000308330 DPF2Q92785 391 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 CEP295NLQ96MC4 621 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 DTNAQ9Y4J8 743 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 PITPNM2Q9BZ72 1349 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 ACSL3O95573 720 aa16■□□□□ 0.15
LEMD3-201ENST00000308330 NR3C2P08235 984 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms