RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
SSH3-201ENST00000308127 KRT4P19013 534 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 ADRA1DP25100 572 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 PSEN1P49768 467 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 STAT4Q14765 748 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 SETDB1Q15047 1291 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 CCNG2Q16589 344 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 LVRNQ6Q4G3 990 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 RFX8Q6ZV50 586 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 OR5B17Q8NGF7 314 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 LRRC8CQ8TDW0 803 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 LGALS13Q9UHV8 139 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 RIPK3Q9Y572 518 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 LRRD1A4D1F6 860 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 VNN1O95497 513 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 LIG4P49917 911 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 CCNHP51946 323 aaPredicted RBP17.54■□□□□ 0.4
SSH3-201ENST00000308127 POLGP54098 1239 aaPredicted RBP17.54■□□□□ 0.4
SSH3-201ENST00000308127 RAD23BP54727 409 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 TAF1BQ53T94 588 aaPredicted RBP17.54■□□□□ 0.4
SSH3-201ENST00000308127 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 ANKRD22Q5VYY1 191 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 PPP1R21Q6ZMI0 780 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.54■□□□□ 0.4
SSH3-201ENST00000308127 VTI1AQ96AJ9 217 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 SMC6Q96SB8 1091 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 HAPLN2Q9GZV7 340 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 EURLQ9NYK6 297 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 FEM1BQ9UK73 627 aa17.54■□□□□ 0.4
SSH3-201ENST00000308127 T-ENOLP0DO92 83 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 NOMO3P69849 1222 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 OGDHQ02218 1023 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 TFDP1Q14186 410 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 PLEKHG4Q58EX7 1191 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 RFWD3Q6PCD5 774 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 SCARA5Q6ZMJ2 495 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 MTDHQ86UE4 582 aaKnown RBP17.53■□□□□ 0.4
SSH3-201ENST00000308127 NLRX1Q86UT6 975 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 FAM13CQ8NE31 585 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 ZNF668Q96K58 619 aaPredicted RBP17.53■□□□□ 0.4
SSH3-201ENST00000308127 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 NUB1Q9Y5A7 615 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 WDR64B1ANS9 1081 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 H0YIN7 160 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 LIASO43766 372 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 GDF10P55107 478 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 MAPK6Q16659 721 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 MSS51Q4VC12 460 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 RNF43Q68DV7 783 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 C4orf19Q8IY42 314 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 ZCCHC9Q8N567 271 aaKnown RBP17.53■□□□□ 0.4
SSH3-201ENST00000308127 RBBP8NLQ8NC74 664 aaPredicted RBP17.53■□□□□ 0.4
SSH3-201ENST00000308127 ZWILCHQ9H900 591 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 XPNPEP1Q9NQW7 623 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
SSH3-201ENST00000308127 CNTNAP1P78357 1384 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 A0A0G2JND7 137 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 ENO4A6NNW6 628 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 CCNB1P14635 433 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 PTGER2P43116 358 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 CENPCQ03188 943 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 ORC1Q13415 861 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 YIPF3Q9GZM5 350 aa17.52■□□□□ 0.4
SSH3-201ENST00000308127 POLR3FQ9H1D9 316 aaPredicted RBP17.52■□□□□ 0.4
SSH3-201ENST00000308127 BRD2P25440 801 aaKnown RBP17.52■□□□□ 0.39
SSH3-201ENST00000308127 GCKP35557 465 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 ZNF252P-AS1Q0IIN9 211 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 TRAF1Q13077 416 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 SPARCL1Q14515 664 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 LIN9Q5TKA1 542 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 FAM160B2Q86V87 743 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 RFWD2Q8NHY2 731 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 LRRN4Q8WUT4 740 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 NUDCD1Q96RS6 583 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 IWS1Q96ST2 819 aa17.52■□□□□ 0.39
SSH3-201ENST00000308127 METTL5Q9NRN9 209 aaKnown RBP17.52■□□□□ 0.39
SSH3-201ENST00000308127 DNALI1O14645 258 aaPredicted RBP17.51■□□□□ 0.39
SSH3-201ENST00000308127 GCNT1Q02742 428 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 BAATQ14032 418 aaPredicted RBP17.51■□□□□ 0.39
SSH3-201ENST00000308127 WDR72Q3MJ13 1102 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 CCHCR1Q8TD31 782 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 CFAP57Q96MR6 1250 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 PDCD2LQ9BRP1 358 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 MRIQ9BWK5 157 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 SLC17A7Q9P2U7 560 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 TCRBV7S3A2A0A539 114 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 LRRIQ4A6NIV6 560 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 PEX11AO75192 247 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
SSH3-201ENST00000308127 EDN1P05305 212 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 ACO1P21399 889 aaKnown RBP17.51■□□□□ 0.39
SSH3-201ENST00000308127 MAN1A1P33908 653 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 SLC1A1P43005 524 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 CAV1Q03135 178 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 DCUN1D2Q6PH85 259 aa17.51■□□□□ 0.39
SSH3-201ENST00000308127 CCDC60Q8IWA6 550 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms