RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 SDCBP2Q9H190 292 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 VRTNQ9H8Y1 702 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 DNAI1Q9UI46 699 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 AGAP1Q9UPQ3 857 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 PCDHB4Q9Y5E5 795 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 TANC1Q9C0D5 1861 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 TRANK1O15050 2925 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 KIF2AO00139 706 aaPredicted RBP7.45□□□□□ -1.22
PTCD2-201ENST00000308077 KRT86O43790 486 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 WEE2P0C1S8 567 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 KCNE1P15382 129 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 ATF7P17544 494 aaPredicted RBP7.45□□□□□ -1.22
PTCD2-201ENST00000308077 CD58P19256 250 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 TNFAIP3P21580 790 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 ATICP31939 592 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 RAP1GAPP47736 663 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 PDE6CP51160 858 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 AFF1P51825 1210 aaKnown RBP7.45□□□□□ -1.22
PTCD2-201ENST00000308077 WDR72Q3MJ13 1102 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF667Q5HYK9 610 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 VPS36Q86VN1 386 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 SLC35F6Q8N357 371 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 RBBP8NLQ8NC74 664 aaPredicted RBP7.45□□□□□ -1.22
PTCD2-201ENST00000308077 GSTCDQ8NEC7 633 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 TAF4BQ92750 862 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 HPDLQ96IR7 371 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 ZFP42Q96MM3 310 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 SMYD3Q9H7B4 428 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 GOLGA2P5Q9HBQ8 144 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 CISHQ9NSE2 258 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
PTCD2-201ENST00000308077 PAXBP1Q9Y5B6 917 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 SQORQ9Y6N5 450 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 SCN5AQ14524 2016 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 ATP8B3O60423 1300 aa7.45□□□□□ -1.22
PTCD2-201ENST00000308077 ANO9A1A5B4 782 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 MACROD2A1Z1Q3 448 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 TMCO5BA8MYB1 307 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 KIF5CO60282 957 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 STAU1O95793 577 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 CFHP08603 1231 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ZSCAN20P17040 1043 aaPredicted RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 CDH8P55286 799 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 RBP5P82980 135 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 CDR2Q01850 454 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 KIF5AQ12840 1032 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 GPNMBQ14956 572 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF569Q5MCW4 686 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 C10orf76Q5T2E6 689 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 C9orf57Q5W0N0 161 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 MRPL10Q7Z7H8 261 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 RTN4RL1Q86UN2 441 aaPredicted RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 BEST2Q8NFU1 509 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 CAGE1Q8TC20 777 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 DIS3LQ8TF46 1054 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 LINC01599Q8WXQ3 324 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 TSC1Q92574 1164 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 PPP1R10Q96QC0 940 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ADAM2Q99965 735 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 SEZ6LQ9BYH1 1024 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 TSGA10Q9BZW7 698 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 SEPT11Q9NVA2 429 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 MIOSQ9NXC5 875 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 UBQLN1Q9UMX0 589 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 MYH10P35580 1976 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 TDRD15B5MCY1 1934 aaKnown RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 MOCS3O95396 460 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 TUBB4AP04350 444 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ITGA4P13612 1032 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 SELPP16109 830 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 MLH1P40692 756 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ID4P47928 161 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ATN1P54259 1190 aaPredicted RBP7.44□□□□□ -1.22
PTCD2-201ENST00000308077 GALCP54803 685 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 SLC39A5Q6ZMH5 540 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 LRRC8DQ7L1W4 858 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 USP38Q8NB14 1042 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 KIF18AQ8NI77 898 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 WHAMMQ8TF30 809 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 ZSWIM1Q9BR11 485 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 HMGXB4Q9UGU5 601 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 CAPN6Q9Y6Q1 641 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 FAM208BQ5VWN6 2430 aa7.44□□□□□ -1.22
PTCD2-201ENST00000308077 A0A0U1RQF3 1178 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 PIRO00625 290 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 BUB1O43683 1085 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 NBNO60934 754 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF623O75123 536 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 TFRCP02786 760 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 H2AFZP0C0S5 128 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 IGFBP6P24592 240 aaPredicted RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 GNA15P30679 374 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 RAB27AP51159 221 aa7.43□□□□□ -1.22
PTCD2-201ENST00000308077 MRPS5P82675 430 aaKnown RBP7.43□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF394Q53GI3 561 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms