RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TTC7AQ9ULT0 858 aaPredicted RBP12.12□□□□□ -0.47
SCG2-201ENST00000305409 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
SCG2-201ENST00000305409 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 GOLGA6L10A0A0M3HER8 536 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 PI4K2BG5E9Z4 385 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 ZEB2O60315 1214 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 NPTXRO95502 500 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
SCG2-201ENST00000305409 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
SCG2-201ENST00000305409 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 MAATS1Q7Z4T9 603 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 ANKS1BQ7Z6G8 1248 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
SCG2-201ENST00000305409 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 FAM71BQ8TC56 605 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 KAT2BQ92831 832 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 EMID1Q96A84 441 aaPredicted RBP12.11□□□□□ -0.47
SCG2-201ENST00000305409 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
SCG2-201ENST00000305409 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 UTP11Q9Y3A2 253 aaKnown RBP12.11□□□□□ -0.47
SCG2-201ENST00000305409 SIP14410 1827 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCG2-201ENST00000305409 AP3M2P53677 418 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 LIN9Q5TKA1 542 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 TLK2Q86UE8 772 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 JAMLQ86YT9 394 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 DNAJB3Q8WWF6 145 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 MCEEQ96PE7 176 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 SNTG2Q9NY99 539 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
SCG2-201ENST00000305409 CCDC66A2RUB6 948 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 PPEF2O14830 753 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 HSF2BPO75031 334 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 MYL3P08590 195 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 PLTPP55058 493 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 SURF1Q15526 300 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 CCDC137Q6PK04 289 aaKnown RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 RASAL3Q86YV0 1011 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 MGAMO43451 1857 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 F8VP50 259 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 TREHO43280 583 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 MMP8P22894 467 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 AKAP5P24588 427 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 HOXA11P31270 313 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 OGDHQ02218 1023 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 SIX1Q15475 284 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 MORN1Q5T089 497 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 CFAP58Q5T655 872 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 TTC19Q6DKK2 380 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 TXNRD3NBQ6F5E7 133 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 CATSPER4Q7RTX7 472 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 IPO4Q8TEX9 1081 aaKnown RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 RUBCNQ92622 972 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 ACAP3Q96P50 834 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 RUFY1Q96T51 708 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 CENPHQ9H3R5 247 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 LRRC4CQ9HCJ2 640 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
SCG2-201ENST00000305409 CHST7Q9NS84 486 aa12.1□□□□□ -0.47
SCG2-201ENST00000305409 KAT6AQ92794 2004 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 UNCXA6NJT0 531 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PHF2O75151 1096 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PROSCO94903 275 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 MCF2P10911 925 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 CTNNA2P26232 953 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 TMEM132DQ14C87 1099 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 TTMPQ5BVD1 217 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 KAZNQ674X7 775 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 PRUNE1Q86TP1 453 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PHF13Q86YI8 300 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 UBA3Q8TBC4 463 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 UBLCP1Q8WVY7 318 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 TMEM40Q8WWA1 233 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 HPDLQ96IR7 371 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ZMAT2Q96NC0 199 aaKnown RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 NFKBIZQ9BYH8 718 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ELOVL4Q9GZR5 314 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 MED4Q9NPJ6 270 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms